GSTDTAP  > 地球科学
DOI10.1126/science.aaw1147
Boltzmann generators: Sampling equilibrium states of many-body systems with deep learning
Noe, Frank1,2,3; Olsson, Simon1; Koehler, Jonas1; Wu, Hao1,4
2019-09-06
发表期刊SCIENCE
ISSN0036-8075
EISSN1095-9203
出版年2019
卷号365期号:6457页码:1001-+
文章类型Article
语种英语
国家Germany; USA; Peoples R China
英文摘要

Computing equilibrium states in condensed-matter many-body systems, such as solvated proteins, is a long-standing challenge. Lacking methods for generating statistically independent equilibrium samples in "one shot:" vast computational effort is invested for simulating these systems in small steps, e.g., using molecular dynamics. Combining deep learning and statistical mechanics, we developed Boltzmann generators, which are shown to generate unbiased one-shot equilibrium samples of representative condensed-matter systems and proteins. Boltzmann generators use neural networks to learn a coordinate transformation of the complex configurational equilibrium distribution to a distribution that can be easily sampled. Accurate computation of free-energy differences and discovery of new configurations are demonstrated, providing a statistical mechanics tool that can avoid rare events during sampling without prior knowledge of reaction coordinates.


领域地球科学 ; 气候变化 ; 资源环境
收录类别SCI-E
WOS记录号WOS:000484732700040
WOS关键词PANCREATIC TRYPSIN-INHIBITOR ; MONTE-CARLO METHOD ; FREE-ENERGY ; TRANSITION ; DYNAMICS
WOS类目Multidisciplinary Sciences
WOS研究方向Science & Technology - Other Topics
引用统计
文献类型期刊论文
条目标识符http://119.78.100.173/C666/handle/2XK7JSWQ/202248
专题地球科学
资源环境科学
气候变化
作者单位1.FU Berlin, Dept Math & Comp Sci, Arnimallee 6, D-14195 Berlin, Germany;
2.FU Berlin, Dept Phys, Arnimallee 14, D-14195 Berlin, Germany;
3.Rice Univ, Dept Chem, POB 1892, Houston, TX 77005 USA;
4.Tongji Univ, Sch Math Sci, Shanghai 200092, Peoples R China
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Noe, Frank,Olsson, Simon,Koehler, Jonas,et al. Boltzmann generators: Sampling equilibrium states of many-body systems with deep learning[J]. SCIENCE,2019,365(6457):1001-+.
APA Noe, Frank,Olsson, Simon,Koehler, Jonas,&Wu, Hao.(2019).Boltzmann generators: Sampling equilibrium states of many-body systems with deep learning.SCIENCE,365(6457),1001-+.
MLA Noe, Frank,et al."Boltzmann generators: Sampling equilibrium states of many-body systems with deep learning".SCIENCE 365.6457(2019):1001-+.
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