GSTDTAP  > 资源环境科学
DOI10.1038/s41467-019-11453-w
GWAS in childhood acute lymphoblastic leukemia reveals novel genetic associations at chromosomes 17q12 and 8q24.21
Wiemels, Joseph L.1,2,3,4; Walsh, Kyle M.1,2; de Smith, Adam J.1; Metayer, Catherine5; Gonseth, Semira1,4; Hansen, Helen M.2; Francis, Stephen S.1,6; Ojha, Juhi1; Smirnov, Ivan2; Barcellos, Lisa5; Xiao, Xiaorong5; Morimoto, Libby5; McKean-Cowdin, Roberta4; Wang, Rong7; Yu, Herbert8; Hoh, Josephine7; Dewan, Andrew T.7; Ma, Xiaomei7
2019-07-30
发表期刊NATURE COMMUNICATIONS
ISSN2041-1723
出版年2018
卷号9
文章类型Article
语种英语
国家USA
英文摘要

Childhood acute lymphoblastic leukemia (ALL) (age 0-14 years) is 20% more common in Latino Americans than non-Latino whites. We conduct a genome-wide association study in a large sample of 3263 Californian children with ALL (including 1949 of Latino heritage) and 3506 controls matched on month and year of birth, sex, and ethnicity, and an additional 12,471 controls from the Kaiser Resource for Genetic Epidemiology Research on Aging Cohort. Replication of the strongest genetic associations is performed in two independent datasets from the Children's Oncology Group and the California Childhood Leukemia Study. Here we identify new risk loci on 17q12 near IKZF3/ZPBP2/GSDMB/ORMDL3, a locus encompassing a transcription factor important for lymphocyte development (IKZF3), and at an 8q24 region known for structural contacts with the MYC oncogene. These new risk loci may impact gene expression via local (four 17q12 genes) or long-range (8q24) interactions, affecting function of well-characterized hematopoietic and growth-regulation pathways.


领域资源环境
收录类别SCI-E
WOS记录号WOS:000422745800021
WOS关键词GENOME-WIDE ASSOCIATION ; SUSCEPTIBILITY LOCI ; FUNCTIONAL VARIATION ; RISK LOCI ; VARIANTS ; CHILDREN ; METAANALYSES ; IMPUTATION ; CDKN2A ; RELAPSE
WOS类目Multidisciplinary Sciences
WOS研究方向Science & Technology - Other Topics
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引用统计
文献类型期刊论文
条目标识符http://119.78.100.173/C666/handle/2XK7JSWQ/204469
专题资源环境科学
作者单位1.Univ Calif San Francisco, Dept Epidemiol & Biostat, 1450 3rd St, San Francisco, CA 94158 USA;
2.Univ Calif San Francisco, Dept Neurol Surg, 1450 3rd St, San Francisco, CA 94158 USA;
3.Univ Calif San Francisco, Inst Human Genet, 1450 3rd St, San Francisco, CA 94158 USA;
4.Univ Southern Calif, Dept Preventat Med, SSB 318D 2001 N Soto St, Los Angeles, CA 90033 USA;
5.Univ Calif Berkeley, Sch Publ Hlth, 1950 Univ Ave,Suite 460, Berkeley, CA 94720 USA;
6.Univ Nevada Reno, Sch Community Hlth Sci, Dept Epidemiol, 1664 N Virginia St, Reno, NV 89557 USA;
7.Yale Univ, Sch Publ Hlth, Dept Chron Dis Epidemiol, 60 Coll St, New Haven, CT 06520 USA;
8.Univ Hawaii, Canc Ctr, 701 Ilalo St, Honolulu, HI 96813 USA
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GB/T 7714
Wiemels, Joseph L.,Walsh, Kyle M.,de Smith, Adam J.,et al. GWAS in childhood acute lymphoblastic leukemia reveals novel genetic associations at chromosomes 17q12 and 8q24.21[J]. NATURE COMMUNICATIONS,2019,9.
APA Wiemels, Joseph L..,Walsh, Kyle M..,de Smith, Adam J..,Metayer, Catherine.,Gonseth, Semira.,...&Ma, Xiaomei.(2019).GWAS in childhood acute lymphoblastic leukemia reveals novel genetic associations at chromosomes 17q12 and 8q24.21.NATURE COMMUNICATIONS,9.
MLA Wiemels, Joseph L.,et al."GWAS in childhood acute lymphoblastic leukemia reveals novel genetic associations at chromosomes 17q12 and 8q24.21".NATURE COMMUNICATIONS 9(2019).
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