GSTDTAP  > 资源环境科学
DOI10.1016/j.tree.2017.03.001
Next-Generation Global Biomonitoring: Large-scale, Automated Reconstruction of Ecological Networks
Bohan, David A.1; Vacher, Corinne2; Tamaddoni-Nezhad, Alireza3; Raybould, Alan4; Dumbrell, Alex J.5; Woodward, Guy6
2017-07-01
发表期刊TRENDS IN ECOLOGY & EVOLUTION
ISSN0169-5347
EISSN1872-8383
出版年2017
卷号32期号:7
文章类型Review
语种英语
国家France; England; Switzerland
英文摘要

We foresee a new global-scale, ecological approach to biomonitoring emerging within the next decade that can detect ecosystem change accurately, cheaply, and generically. Next-generation sequencing of DNA sampled from the Earth's environments would provide data for the relative abundance of operational taxonomic units or ecological functions. Machine-learning methods would then be used to reconstruct the ecological networks of interactions implicit in the raw NGS data. Ultimately, we envision the development of autonomous samplers that would sample nucleic acids and upload NGS sequence data to the cloud for network reconstruction. Large numbers of these samplers, in a global array, would allow sensitive automated biomonitoring of the Earth's major ecosystems at high spatial and temporal resolution, revolutionising our understanding of ecosystem change.


领域资源环境
收录类别SCI-E
WOS记录号WOS:000403237400001
WOS关键词FOOD-WEB ; ENVIRONMENTAL IMPACTS ; SEQUENCING DATA ; SIZE ; TIME ; BIODIVERSITY ; COMMUNITIES ; INFERENCE ; ABUNDANCE ; DYNAMICS
WOS类目Ecology ; Evolutionary Biology ; Genetics & Heredity
WOS研究方向Environmental Sciences & Ecology ; Evolutionary Biology ; Genetics & Heredity
引用统计
文献类型期刊论文
条目标识符http://119.78.100.173/C666/handle/2XK7JSWQ/27578
专题资源环境科学
作者单位1.Univ Bourgogne Franche Comte, Agroecol, AgroSup Dijon, INRA, F-21000 Dijon, France;
2.Univ Bordeaux, BIOGECO, INRA, F-33615 Pessac, France;
3.Imperial Coll London, Dept Comp, Computat Bioinformat Lab, London SW7 2AZ, England;
4.Syngenta Crop Protect AG, POB 4002, Basel, Switzerland;
5.Univ Essex, Sch Biol Sci, Colchester CO4 3SQ, Essex, England;
6.Imperial Coll London, Dept Life Sci, Silwood Pk Campus, Ascot SL5 7PY, Berks, England
推荐引用方式
GB/T 7714
Bohan, David A.,Vacher, Corinne,Tamaddoni-Nezhad, Alireza,et al. Next-Generation Global Biomonitoring: Large-scale, Automated Reconstruction of Ecological Networks[J]. TRENDS IN ECOLOGY & EVOLUTION,2017,32(7).
APA Bohan, David A.,Vacher, Corinne,Tamaddoni-Nezhad, Alireza,Raybould, Alan,Dumbrell, Alex J.,&Woodward, Guy.(2017).Next-Generation Global Biomonitoring: Large-scale, Automated Reconstruction of Ecological Networks.TRENDS IN ECOLOGY & EVOLUTION,32(7).
MLA Bohan, David A.,et al."Next-Generation Global Biomonitoring: Large-scale, Automated Reconstruction of Ecological Networks".TRENDS IN ECOLOGY & EVOLUTION 32.7(2017).
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