Global S&T Development Trend Analysis Platform of Resources and Environment
DOI | 10.1126/science.abe5650 |
Geometric deep learning of RNA structure | |
Raphael J. L. Townshend; Stephan Eismann; Andrew M. Watkins; Ramya Rangan; Maria Karelina; Rhiju Das; Ron O. Dror | |
2021-08-27 | |
发表期刊 | Science |
出版年 | 2021 |
英文摘要 | RNA molecules fold into complex three-dimensional shapes that are difficult to determine experimentally or predict computationally. Understanding these structures may aid in the discovery of drugs for currently untreatable diseases. Townshend et al. introduced a machine-learning method that significantly improves prediction of RNA structures (see the Perspective by Weeks). Most other recent advances in deep learning have required a tremendous amount of data for training. The fact that this method succeeds given very little training data suggests that related methods could address unsolved problems in many fields where data are scarce. Science , abe5650, this issue p. [1047][1]; see also abk1971, p. [964][2] RNA molecules adopt three-dimensional structures that are critical to their function and of interest in drug discovery. Few RNA structures are known, however, and predicting them computationally has proven challenging. We introduce a machine learning approach that enables identification of accurate structural models without assumptions about their defining characteristics, despite being trained with only 18 known RNA structures. The resulting scoring function, the Atomic Rotationally Equivariant Scorer (ARES), substantially outperforms previous methods and consistently produces the best results in community-wide blind RNA structure prediction challenges. By learning effectively even from a small amount of data, our approach overcomes a major limitation of standard deep neural networks. Because it uses only atomic coordinates as inputs and incorporates no RNA-specific information, this approach is applicable to diverse problems in structural biology, chemistry, materials science, and beyond. [1]: /lookup/doi/10.1126/science.abe5650 [2]: /lookup/doi/10.1126/science.abk1971 |
领域 | 气候变化 ; 资源环境 |
URL | 查看原文 |
引用统计 | |
文献类型 | 期刊论文 |
条目标识符 | http://119.78.100.173/C666/handle/2XK7JSWQ/336678 |
专题 | 气候变化 资源环境科学 |
推荐引用方式 GB/T 7714 | Raphael J. L. Townshend,Stephan Eismann,Andrew M. Watkins,et al. Geometric deep learning of RNA structure[J]. Science,2021. |
APA | Raphael J. L. Townshend.,Stephan Eismann.,Andrew M. Watkins.,Ramya Rangan.,Maria Karelina.,...&Ron O. Dror.(2021).Geometric deep learning of RNA structure.Science. |
MLA | Raphael J. L. Townshend,et al."Geometric deep learning of RNA structure".Science (2021). |
条目包含的文件 | 条目无相关文件。 |
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