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Mouse models of neutropenia reveal progenitor-stage-specific defects 期刊论文
NATURE, 2020
作者:  Lombardo, Umberto;  Iriarte, Jose;  Hilbert, Lautaro;  Ruiz-Perez, Javier;  Capriles, Jose M.;  Veit, Heinz
收藏  |  浏览/下载:11/0  |  提交时间:2020/07/03

Advances in genetics and sequencing have identified a plethora of disease-associated and disease-causing genetic alterations. To determine causality between genetics and disease, accurate models for molecular dissection are required  however, the rapid expansion of transcriptional populations identified through single-cell analyses presents a major challenge for accurate comparisons between mutant and wild-type cells. Here we generate mouse models of human severe congenital neutropenia (SCN) using patient-derived mutations in the GFI1 transcription factor. To determine the effects of SCN mutations, we generated single-cell references for granulopoietic genomic states with linked epitopes(1), aligned mutant cells to their wild-type equivalents and identified differentially expressed genes and epigenetic loci. We find that GFI1-target genes are altered sequentially, as cells go through successive states of differentiation. These insights facilitated the genetic rescue of granulocytic specification but not post-commitment defects in innate immune effector function, and underscore the importance of evaluating the effects of mutations and therapy within each relevant cell state.


Mouse models of severe congenital neutropenia using patient-derived mutations in the GFI1 locus are used to determine the mechanisms by which the disease progresses.


  
Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome 期刊论文
SCIENCE, 2019, 366 (6465) : 606-+
作者:  Carrion, Victor J.;  Perez-Jaramillo, Juan;  Cordovez, Viviane;  Tracanna, Vittorio;  de Hollander, Mattias;  Ruiz-Buck, Daniel;  Mendes, Lucas W.;  van Ijcken, Wilfred F. J.;  Gomez-Exposito, Ruth;  Elsayed, Somayah S.;  Mohanraju, Prarthana;  Arifah, Adini;  van der Oost, John;  Paulson, Joseph N.;  Mendes, Rodrigo;  van Wezel, Gilles P.;  Medema, Marnix H.;  Raaijmakers, Jos M.
收藏  |  浏览/下载:10/0  |  提交时间:2020/02/17
Integration of WorldView-2 and airborne laser scanning data to classify defoliation levels in Quercus ilex L. Dehesas affected by root rot mortality: Management implications 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2019, 451
作者:  Navarro-Cerrillo, Rafael M.;  Varo-Martinez, Ma Angeles;  Acosta, Cristina;  Palacios Rodriguez, Guillermo;  Sanchez-Cuesta, Rafael;  Gomez, Francisco J. Ruiz
收藏  |  浏览/下载:15/0  |  提交时间:2019/11/27
Dehesas forest type  Holm oak decline  Defoliation  Predictor remote sensing datasets  Segmentation  Random forest  
Two decades of glacier mass loss along the Andes 期刊论文
NATURE GEOSCIENCE, 2019, 12 (10) : 803-+
作者:  Dussaillant, I;  Berthier, E.;  Brun, F.;  Masiokas, M.;  Hugonnet, R.;  Favier, V;  Rabatel, A.;  Pitte, P.;  Ruiz, L.
收藏  |  浏览/下载:10/0  |  提交时间:2019/11/27
A giant exoplanet orbiting a very-low-mass star challenges planet formation models 期刊论文
SCIENCE, 2019, 365 (6460) : 1441-+
作者:  Morales, J. C.;  Mustill, A. J.;  Ribas, I.;  Davies, M. B.;  Reiners, A.;  Bauers, F. F.;  Kossakowski, D.;  Herrero, E.;  Rodriguez, E.;  Lopez-Gonzalez, M. J.;  Rodriguez-Lopez, C.;  Bejar, V. J. S.;  Gonzalez-Cuesta, L.;  Luque, R.;  Palle, E.;  Perger, M.;  Baroch, D.;  Johansen, A.;  Klahr, H.;  Mordasini, C.;  Anglada-Escude, G.;  Caballero, J. A.;  Cortes-Contreras, M.;  Dreizler, S.;  Lafarga, M.;  Nagel, E.;  Passegger, V. M.;  Reffert, S.;  Rosich, A.;  Schweitzer, A.;  Tal-Or, L.;  Trifonov, T.;  Zechmeister, M.;  Quirrenbach, A.;  Amado, P. J.;  Guenther, E. W.;  Hagen, H. -J.;  Henning, T.;  Jeffers, S. V.;  Kaminski, A.;  Kuester, M.;  Montes, D.;  Seifert, W.;  Abellan, F. J.;  Abril, M.;  Aceituno, J.;  Aceituno, F. J.;  Alonso-Floriano, F. J.;  Ammler-von Eiff, M.;  Antona, R.;  Arroyo-Torres, B.;  Azzaro, M.;  Barrado, D.;  Becerril-Jarque, S.;  Benitez, D.;  Berdinas, Z. M.;  Bergond, G.;  Brinkmoller, M.;  del Burgo, C.;  Burn, R.;  Calvo-Ortega, R.;  Cano, J.;  Cardenas, M. C.;  Cardona Guillen, C.;  Carro, J.;  Casa, E.;  Casanova, V.;  Casasayas-Barris, N.;  Chaturvedi, P.;  Cifuentes, C.;  Claret, A.;  Colome, J.;  Czesla, S.;  Diez-Alonso, E.;  Dorda, R.;  Emsenhuber, A.;  Fernandez, M.;  Fernandez-Martin, A.;  Ferro, I. M.;  Fuhrmeister, B.;  Galadi-Enriquez, D.;  Gallardo Cava, I.;  Garcia Vargas, M. L.;  Garcia-Piquer, A.;  Gesa, L.;  Gonzalez-Alvarez, E.;  Gonzalez Hernandez, J. I.;  Gonzalez-Peinado, R.;  Guardia, J.;  Guijarro, A.;  de Guindos, E.;  Hatzes, A. P.;  Hauschildt, P. H.;  Hedrosa, R. P.;  Hermelo, I.;  Hernandez Arabi, R.;  Hernandez Otero, F.;  Hintz, D.;  Holgado, G.;  Huber, A.;  Huke, P.;  Johnson, E. N.;  de Juan, E.;  Kehr, M.;  Kemmer, J.;  Kim, M.;  Klueter, J.;  Klutsch, A.;  Labarga, F.;  Labiche, N.;  Lalitha, S.;  Lampon, M.;  Lara, L. M.;  Launhardt, R.;  Lazaro, F. J.;  Lizon, J. -L.;  Llamas, M.;  Lodieu, N.;  Lopez del Fresno, M.;  Lopez Salas, . F.;  Lopez-Santiago, J.;  Magan Madinabeitia, H.;  Mall, U.;  Mancini, L.;  Mandel, H.;  Marfil, E.;  Marin Molina, J. . A.;  Martin, E. L.;  Martin-Fernandez, P.;  Martin-Ruiz, S.;  Martinez-Rodriguez, H.;  Marvin, C. J.;  Mirabet, E.;  Moya, A.;  Naranjo, V.;  Nelson, R. P.;  Nortmann, L.;  Nowak, G.;  Ofir, A.;  Pascua, J.;  Pavlov, A.;  Pedraz, S.;  Perez Medialdea, D.;  Perez-Calpena, A.;  Perryman, M. A. C.;  Rabaza, O.;  Ramon Ballesta, A.;  Rebolo, R.;  Redondo, P.;  Rix, H. -W.;  Rodler, F.;  Rodriguez Trinidad, A.;  Sabotta, S.;  Sadegi, S.;  Salz, M.;  Sanchez-Blanco, E.;  Sanchez Carrasco, M. A.;  Sanchez-Lopez, A.;  Sanz-Forcada, J.;  Sarkis, P.;  Sarmiento, L. F.;  Schafer, S.;  Schlecker, M.;  Schmitt, J. H. M. M.;  Schofer, P.;  Solano, E.;  Sota, A.;  Stahl, O.;  Stock, S.;  Stuber, T.;  Sturmer, J.;  Suarez, J. C.;  Tabernero, H. M.;  Tulloch, S. M.;  Veredas, G.;  Vico-Linares, J. I.;  Vilardell, F.;  Wagner, K.;  Winkler, J.;  Wolthoff, V.;  Yan, F.;  Zapatero Osorio, M. R.
收藏  |  浏览/下载:16/0  |  提交时间:2019/11/27
IRE1 alpha-XBP1 signaling in leukocytes controls prostaglandin biosynthesis and pain 期刊论文
SCIENCE, 2019, 365 (6450) : 248-+
作者:  Chopra, Sahil;  Giovanelli, Paolo;  Alvarado-Vazquez, Perla Abigail;  Alonso, Sara;  Song, Minkyung;  Sandoval, Tito A.;  Chae, Chang-Suk;  Tan, Chen;  Fonseca, Miriam M.;  Gutierrez, Silvia;  Jimenez, Leandro;  Subbaramaiah, Kotha;  Iwawaki, Takao;  Kingsley, Philip J.;  Marnett, Lawrence J.;  Kossenkov, Andrew V.;  Crespo, Mariano Sanchez;  Dannenberg, Andrew J.;  Glimcher, Laurie H.;  Romero-Sandoval, E. Alfonso;  Cubillos-Ruiz, Juan R.
收藏  |  浏览/下载:14/0  |  提交时间:2019/11/27
The uncertain future of protected lands and waters 期刊论文
SCIENCE, 2019, 364 (6443) : 881-+
作者:  Kroner, Rachel E. Golden;  Qin, Siyu;  Cook, Carly N.;  Krithivasan, Roopa;  Pack, Shalynn M.;  Bonilla, Oscar D.;  Anne Cort-Kansinally, Kerry;  Coutinho, Bruno;  Feng, Mingmin;  Martinez Garcia, Maria Isabel;  He, Yifan;  Kennedy, Chris J.;  Lebreton, Clotilde;  Carlos Ledezma, Juan;  Lovejoy, Thomas E.;  Luther, David A.;  Parmanand, Yohan;  Augusto Ruiz-Agudelo, Cesar;  Yerena, Edgard;  Moron Zambrano, Vilisa;  Mascia, Michael B.
收藏  |  浏览/下载:6/0  |  提交时间:2019/11/27
Tectonic evolution of petroleum systems within the onshore Llanos Basin: Insights on the presence of Orinoco heavy oil analogs in Colombia and a comparison with other heavy oil provinces worldwide 期刊论文
AAPG BULLETIN, 2019, 103 (5) : 1179-1224
作者:  Mora, A.;  Garcia-Bautista, Diego Fernando;  Reyes-Harker, A.;  Parra, M.;  Blanco, V;  Sanchez, N.;  de la Parra, F.;  Caballero, V;  Rodriguez, G.;  Ruiz, C.;  Naranjo, J.;  Teson, E.;  Nino, F.;  Quintero, I;  Moreno, N.;  Cardozo, Eduardo;  Gamba, Nestor;  Horton, Brian K.;  Arias-Martinez, Juan Pablo
收藏  |  浏览/下载:9/0  |  提交时间:2019/11/26
In situ X-ray diffraction measurement of shock-wave-driven twinning and lattice dynamics 期刊论文
NATURE, 2017, 550 (7677) : 496-+
作者:  Wehrenberg, C. E.;  McGonegle, D.;  Bolme, C.;  Higginbotham, A.;  Lazicki, A.;  Lee, H. J.;  Nagler, B.;  Park, H. -S.;  Remington, B. A.;  Rudd, R. E.;  Sliwa, M.;  Suggit, M.;  Swift, D.;  Tavella, F.;  Zepeda-Ruiz, L.;  Wark, J. S.
收藏  |  浏览/下载:11/0  |  提交时间:2019/11/27
Extreme Competence: Keystone Hosts of Infections 期刊论文
TRENDS IN ECOLOGY & EVOLUTION, 2019, 34 (4) : 303-314
作者:  Martin, Lynn B.;  Addison, BriAnne;  Bean, Andrew G. D.;  Buchanan, Katherine L.;  Crino, Ondi L.;  Eastwood, Justin R.;  Flies, Andrew S.;  Hamede, Rodrigo;  Hill, Geoffrey E.;  Klaassen, Marcel;  Koch, Rebecca E.;  Martens, Johanne M.;  Napolitano, Constanza;  Narayan, Edward J.;  Peacock, Lee;  Peel, Alison J.;  Peters, Anne;  Raven, Nynke;  Risely, Alice;  Roast, Michael J.;  Rollins, Lee A.;  Ruiz-Aravena, Manuel;  Selechnik, Dan;  Stokes, Helena S.;  Ujvari, Beata;  Grogan, Laura F.
收藏  |  浏览/下载:12/0  |  提交时间:2019/04/09