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Global maps of soil temperature 期刊论文
Global Change Biology, 2022
作者:  Jonas J. Lembrechts;  Johan van den Hoogen;  Juha Aalto;  Michael B. Ashcroft;  Pieter De Frenne;  Julia Kemppinen;  Martin Kopecký;  Miska Luoto;  Ilya M. D. Maclean;  Thomas W. Crowther;  Joseph J. Bailey;  Stef Haesen;  David H. Klinges;  Pekka Niittynen;  Brett R. Scheffers;  Koenraad Van Meerbeek;  Peter Aartsma;  Otar Abdalaze;  Mehdi Abedi;  Rien Aerts;  Negar Ahmadian;  Antje Ahrends;  Juha M. Alatalo;  Jake M. Alexander;  Camille Nina Allonsius;  Jan Altman;  Christof Ammann;  Christian Andres;  Christopher Andrews;  Jonas Ardö;  Nicola Arriga;  Alberto Arzac;  Valeria Aschero;  Rafael L. Assis;  Jakob Johann Assmann;  Maaike Y. Bader;  Khadijeh Bahalkeh;  Peter Baranč;  ok;  Isabel C. Barrio;  Agustina Barros;  Matti Barthel;  Edmund W. Basham;  Marijn Bauters;  Manuele Bazzichetto;  Luca Belelli Marchesini;  Michael C. Bell;  Juan C. Benavides;  José;  Luis Benito Alonso;  Bernd J. Berauer;  Jarle W. Bjerke;  Robert G. Bjö;  rk;  Mats P. Bjö;  rkman;  Katrin Bjö;  rnsdó;  ttir;  Benjamin Blonder;  Pascal Boeckx;  Julia Boike;  Stef Bokhorst;  ;  rbara N. S. Brum;  Josef Brů;  na;  Nina Buchmann;  Pauline Buysse;  José;  Luí;  s Camargo;  Otá;  vio C. Campoe;  Onur Candan;  Rafaella Canessa;  Nicoletta Cannone;  Michele Carbognani;  Jofre Carnicer;  Angé;  lica Casanova-Katny;  Simone Cesarz;  Bogdan Chojnicki;  Philippe Choler;  Steven L. Chown;  Edgar F. Cifuentes;  Marek Č;  iliak;  Tamara Contador;  Peter Convey;  Elisabeth J. Cooper;  Edoardo Cremonese;  Salvatore R. Curasi;  Robin Curtis;  Maurizio Cutini;  C. Johan Dahlberg;  Gergana N. Daskalova;  Miguel Angel de Pablo;  Stefano Della Chiesa;  ;  rgen Dengler;  Bart Deronde;  Patrice Descombes;  Valter Di Cecco;  Michele Di Musciano;  Jan Dick;  Romina D. Dimarco;  Jiri Dolezal;  Ellen Dorrepaal;  Jiř;  í;  Duš;  ek;  Nico Eisenhauer;  Lars Eklundh;  Todd E. Erickson;  Brigitta Erschbamer;  Werner Eugster;  Robert M. Ewers;  Dan A. Exton;  Nicolas Fanin;  Fatih Fazlioglu;  Iris Feigenwinter;  Giuseppe Fenu;  Olga Ferlian;  M. Rosa Ferná;  ndez Calzado;  Eduardo Ferná;  ndez-Pascual;  Manfred Finckh;  Rebecca Finger Higgens;  T'ai G. W. Forte;  Erika C. Freeman;  Esther R. Frei;  Eduardo Fuentes-Lillo;  Rafael A. Garcí;  a;  Marí;  a B. Garcí;  a;  Charly Gé;  ron;  Mana Gharun;  Dany Ghosn;  Khatuna Gigauri;  Anne Gobin;  Ignacio Goded;  Mathias Goeckede;  Felix Gottschall;  Keith Goulding;  Sanne Govaert;  Bente Jessen Graae;  Sarah Greenwood;  Caroline Greiser;  Achim Grelle;  Benoit Gué;  nard;  Mauro Guglielmin;  Joannè;  s Guillemot;  Peter Haase;  Sylvia Haider;  Aud H. Halbritter;  Maroof Hamid;  Albin Hammerle;  Arndt Hampe;  Siri V. Haugum;  Lucia Hederová;  Bernard Heinesch;  Carole Helfter;  Daniel Hepenstrick;  Maximiliane Herberich;  Mathias Herbst;  Luise Hermanutz;  David S. Hik;  Raú;  l Hoffré;  n;  ;  rgen Homeier;  Lukas Hö;  rtnagl;  Toke T. Hø;  ye;  Filip Hrbacek;  Kristoffer Hylander;  Hiroki Iwata;  Marcin Antoni Jackowicz-Korczynski;  Hervé;  Jactel;  ;  rvi Jä;  rveoja;  Szymon Jastrzę;  bowski;  Anke Jentsch;  Juan J. Jimé;  nez;  Ingibjö;  rg S. Jó;  nsdó;  ttir;  Tommaso Jucker;  Alistair S. Jump;  Radoslaw Juszczak;  ;  bert Kanka;  ;  t Kaš;  par;  George Kazakis;  Julia Kelly;  Anzar A. Khuroo;  Leif Klemedtsson;  Marcin Klisz;  Natascha Kljun;  Alexander Knohl;  Johannes Kobler;  Jozef Kollá;  r;  Martyna M. Kotowska;  Bence Ková;  cs;  Juergen Kreyling;  Andrea Lamprecht;  Simone I. Lang;  Christian Larson;  Keith Larson;  Kamil Laska;  Guerric le Maire;  Rachel I. Leihy;  Luc Lens;  Bengt Liljebladh;  Annalea Lohila;  Juan Lorite;  Benjamin Loubet;  Joshua Lynn;  Martin Macek;  Roy Mackenzie;  Enzo Magliulo;  Regine Maier;  Francesco Malfasi;  Františ;  ek Má;  liš;  Matě;  j Man;  Giovanni Manca;  Antonio Manco;  Tanguy Manise;  Paraskevi Manolaki;  Felipe Marciniak;  Radim Matula;  Ana Clara Mazzolari;  Sergiy Medinets;  Volodymyr Medinets;  Camille Meeussen;  Sonia Merinero;  Rita de Cá;  ssia Guimarã;  es Mesquita;  Katrin Meusburger;  Filip J. R. Meysman;  Sean T. Michaletz;  Ann Milbau;  Dmitry Moiseev;  Pavel Moiseev;  Andrea Mondoni;  Ruth Monfries;  Leonardo Montagnani;  Mikel Moriana-Armendariz;  Umberto Morra di Cella;  Martin Mö;  rsdorf;  Jonathan R. Mosedale;  Lena Muffler;  Miriam Muñ;  oz-Rojas;  Jonathan A. Myers;  Isla H. Myers-Smith;  Laszlo Nagy;  Marianna Nardino;  Ilona Naujokaitis-Lewis;  Emily Newling;  Lena Nicklas;  Georg Niedrist;  Armin Niessner;  Mats B. Nilsson;  Signe Normand;  Marcelo D. Nosetto;  Yann Nouvellon;  Martin A. Nuñ;  ez;  Romà;  Ogaya;  ;  ;  me Ogé;  e;  Joseph Okello;  Janusz Olejnik;  ;  rgen Eivind Olesen;  Ø;  ystein H. Opedal;  Simone Orsenigo;  Andrej Palaj;  Timo Pampuch;  Alexey V. Panov;  Meelis Pä;  rtel;  Ada Pastor;  Aní;  bal Pauchard;  Harald Pauli;  Marian Pavelka;  William D. Pearse;  Matthias Peichl;  Loï;  c Pellissier;  Rachel M. Penczykowski;  Josep Penuelas;  Matteo Petit Bon;  Alessandro Petraglia;  Shyam S. Phartyal;  Gareth K. Phoenix;  Casimiro Pio;  Andrea Pitacco;  Camille Pitteloud;  Roman Plichta;  Francesco Porro;  Miguel Portillo-Estrada;  ;  ;  me Poulenard;  Rafael Poyatos;  Anatoly S. Prokushkin;  Radoslaw Puchalka;  Mihai Puș;  caș;  Dajana Radujković;  Krystal Randall;  Amanda Ratier Backes;  Sabine Remmele;  Wolfram Remmers;  David Renault;  Anita C. Risch;  Christian Rixen;  Sharon A. Robinson;  Bjorn J. M. Robroek;  Adrian V. Rocha;  Christian Rossi;  Graziano Rossi;  Olivier Roupsard;  Alexey V. Rubtsov;  Patrick Saccone;  Clotilde Sagot;  Jhonatan Sallo Bravo;  Cinthya C. Santos;  Judith M. Sarneel;  Tobias Scharnweber;  Jonas Schmeddes;  Marius Schmidt;  Thomas Scholten;  Max Schuchardt;  Naomi Schwartz;  Tony Scott;  Julia Seeber;  Ana Cristina Segalin de Andrade;  Tim Seipel;  Philipp Semenchuk;  Rebecca A. Senior;  Josep M. Serra-Diaz;  Piotr Sewerniak;  Ankit Shekhar;  Nikita V. Sidenko;  Lukas Siebicke;  Laura Siegwart Collier;  Elizabeth Simpson;  David P. Siqueira;  Zuzana Sitková;  Johan Six;  Marko Smiljanic;  Stuart W. Smith;  Sarah Smith-Tripp;  Ben Somers;  Mia Vedel Sø;  rensen;  José;  Joã;  o L. L. Souza;  Bartolomeu Israel Souza;  Arildo Souza Dias;  Marko J. Spasojevic;  James D. M. Speed;  Fabien Spicher;  Angela Stanisci;  Klaus Steinbauer;  Rainer Steinbrecher;  Michael Steinwandter;  Michael Stemkovski;  ;  rg G. Stephan;  Christian Stiegler;  Stefan Stoll;  Martin Svá;  tek;  Miroslav Svoboda;  Torbern Tagesson;  Andrew J. Tanentzap;  Franziska Tanneberger;  Jean-Paul Theurillat;  Haydn J. D. Thomas;  Andrew D. Thomas;  Katja Tielbö;  rger;  Marcello Tomaselli;  Urs Albert Treier;  Mario Trouillier;  Pavel Dan Turtureanu;  Rosamond Tutton;  Vilna A. Tyystjä;  rvi;  Masahito Ueyama;  Karol Ujhá;  zy;  Mariana Ujhá;  zyová;  Domas Uogintas;  Anastasiya V. Urban;  Josef Urban;  Marek Urbaniak;  Tudor-Mihai Ursu;  Francesco Primo Vaccari;  Stijn Van de Vondel;  Liesbeth van den Brink;  Maarten Van Geel;  Vigdis Vandvik;  Pieter Vangansbeke;  Andrej Varlagin;  G. F. Veen;  Elmar Veenendaal;  Susanna E. Venn;  Hans Verbeeck;  Erik Verbrugggen;  Frank G. A. Verheijen;  Luis Villar;  Luca Vitale;  Pascal Vittoz;  Maria Vives-Ingla;  Jonathan von Oppen;  Josefine Walz;  Runxi Wang;  Yifeng Wang;  Robert G. Way;  Ronja E. M. Wedegä;  rtner;  Robert Weigel;  Jan Wild;  Matthew Wilkinson;  Martin Wilmking;  Lisa Wingate;  Manuela Winkler;  Sonja Wipf;  Georg Wohlfahrt;  Georgios Xenakis;  Yan Yang;  Zicheng Yu;  Kailiang Yu;  Florian Zellweger;  Jian Zhang;  Zhaochen Zhang;  Peng Zhao;  Klaudia Ziembliń;  ska;  Reiner Zimmermann;  Shengwei Zong;  Viacheslav I. Zyryanov;  Ivan Nijs;  Jonathan Lenoir
收藏  |  浏览/下载:41/0  |  提交时间:2022/02/23
Fine root dynamics across pantropical rainforest ecosystems 期刊论文
Global Change Biology, 2021
作者:  Walter Huaraca Huasco;  Terhi Riutta;  ;  cile A. J. Girardin;  Fernando Hancco Pacha;  Beisit L. Puma Vilca;  Sam Moore;  Sami W. Rifai;  Jhon del Aguila-Pasquel;  Alejandro Araujo Murakami;  Renata Freitag;  Alexandra C. Morel;  Sheleme Demissie;  Christopher E. Doughty;  Imma Oliveras;  Darcy F. Galiano Cabrera;  Liliana Durand Baca;  Filio Farfá;  n Amé;  zquita;  Javier E. Silva Espejo;  Antonio C.L. da Costa;  Erick Oblitas Mendoza;  Carlos Alberto Quesada;  Fidele Evouna Ondo;  Josué;  Edzang Ndong;  Kathryn J. Jeffery;  Vianet Mihindou;  Lee J. T. White;  Natacha N'ssi Bengone;  Forzia Ibrahim;  Shalom D. Addo-Danso;  Akwasi Duah-Gyamfi;  Gloria Djaney Djagbletey;  Kennedy Owusu-Afriyie;  Lucy Amissah;  Armel T. Mbou;  Toby R. Marthews;  Daniel B. Metcalfe;  Luiz E. O. Aragã;  o;  Ben H. Marimon-Junior;  Beatriz S. Marimon;  Noreen Majalap;  Stephen Adu-Bredu;  Katharine A. Abernethy;  Miles Silman;  Robert M. Ewers;  Patrick Meir;  Yadvinder Malhi
收藏  |  浏览/下载:20/0  |  提交时间:2021/06/15
Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil 期刊论文
Science, 2021
作者:  Nuno R. Faria;  Thomas A. Mellan;  Charles Whittaker;  Ingra M. Claro;  Darlan da S. Candido;  Swapnil Mishra;  Myuki A. E. Crispim;  Flavia C. S. Sales;  Iwona Hawryluk;  John T. McCrone;  Ruben J. G. Hulswit;  Lucas A. M. Franco;  Mariana S. Ramundo;  Jaqueline G. de Jesus;  Pamela S. Andrade;  Thais M. Coletti;  Giulia M. Ferreira;  Camila A. M. Silva;  Erika R. Manuli;  Rafael H. M. Pereira;  Pedro S. Peixoto;  Moritz U. G. Kraemer;  Nelson Gaburo;  Cecilia da C. Camilo;  Henrique Hoeltgebaum;  William M. Souza;  Esmenia C. Rocha;  Leandro M. de Souza;  Mariana C. de Pinho;  Leonardo J. T. Araujo;  Frederico S. V. Malta;  Aline B. de Lima;  Joice do P. Silva;  Danielle A. G. Zauli;  Alessandro C. de S. Ferreira;  Ricardo P. Schnekenberg;  Daniel J. Laydon;  Patrick G. T. Walker;  Hannah M. Schlüter;  Ana L. P. dos Santos;  Maria S. Vidal;  Valentina S. Del Caro;  Rosinaldo M. F. Filho;  Helem M. dos Santos;  Renato S. Aguiar;  José L. Proença-Modena;  Bruce Nelson;  James A. Hay;  Mélodie Monod;  Xenia Miscouridou;  Helen Coupland;  Raphael Sonabend;  Michaela Vollmer;  Axel Gandy;  Carlos A. Prete;  Vitor H. Nascimento;  Marc A. Suchard;  Thomas A. Bowden;  Sergei L. K. Pond;  Chieh-Hsi Wu;  Oliver Ratmann;  Neil M. Ferguson;  Christopher Dye;  Nick J. Loman;  Philippe Lemey;  Andrew Rambaut;  Nelson A. Fraiji;  Maria do P. S. S. Carvalho;  Oliver G. Pybus;  Seth Flaxman;  Samir Bhatt;  Ester C. Sabino
收藏  |  浏览/下载:14/0  |  提交时间:2021/06/07
Incorporation of a nucleoside analog maps genome repair sites in postmitotic human neurons 期刊论文
Science, 2021
作者:  Dylan A. Reid;  Patrick J. Reed;  Johannes C. M. Schlachetzki;  Ioana I. Nitulescu;  Grace Chou;  Enoch C. Tsui;  Jeffrey R. Jones;  Sahaana Chandran;  Ake T. Lu;  Claire A. McClain;  Jean H. Ooi;  Tzu-Wen Wang;  Addison J. Lana;  Sara B. Linker;  Anthony S. Ricciardulli;  Shong Lau;  Simon T. Schafer;  Steve Horvath;  Jesse R. Dixon;  Nasun Hah;  Christopher K. Glass;  Fred H. Gage
收藏  |  浏览/下载:15/0  |  提交时间:2021/04/06
COSORE: A community database for continuous soil respiration and other soil‐atmosphere greenhouse gas flux data 期刊论文
Global Change Biology, 2020
作者:  Ben Bond‐;  Lamberty;  Danielle S. Christianson;  Avni Malhotra;  Stephanie C. Pennington;  Debjani Sihi;  Amir AghaKouchak;  Hassan Anjileli;  M. Altaf Arain;  Juan J. Armesto;  Samaneh Ashraf;  Mioko Ataka;  Dennis Baldocchi;  Thomas Andrew Black;  Nina Buchmann;  Mariah S. Carbone;  Shih‐;  Chieh Chang;  Patrick Crill;  Peter S. Curtis;  Eric A. Davidson;  Ankur R. Desai;  John E. Drake;  Tarek S. El‐;  Madany;  Michael Gavazzi;  Carolyn‐;  Monika Gö;  rres;  Christopher M. Gough;  Michael Goulden;  Jillian Gregg;  Omar Gutié;  rrez del Arroyo;  Jin‐;  Sheng He;  Takashi Hirano;  Anya Hopple;  Holly Hughes;  ;  rvi Jä;  rveoja;  Rachhpal Jassal;  Jinshi Jian;  Haiming Kan;  Jason Kaye;  Yuji Kominami;  Naishen Liang;  David Lipson;  Catriona A. Macdonald;  Kadmiel Maseyk;  Kayla Mathes;  Marguerite Mauritz;  Melanie A. Mayes;  Steve McNulty;  Guofang Miao;  Mirco Migliavacca;  Scott Miller;  Chelcy F. Miniat;  Jennifer G. Nietz;  Mats B. Nilsson;  Asko Noormets;  Hamidreza Norouzi;  Christine S. O’;  Connell;  Bruce Osborne;  Cecilio Oyonarte;  Zhuo Pang;  Matthias Peichl;  Elise Pendall;  Jorge F. Perez‐;  Quezada;  Claire L. Phillips;  Richard P. Phillips;  James W. Raich;  Alexandre A. Renchon;  Nadine K. Ruehr;  Enrique P. Sá;  nchez‐;  Cañ;  ete;  Matthew Saunders;  Kathleen E. Savage;  Marion Schrumpf;  Russell L. Scott;  Ulli Seibt;  Whendee L. Silver;  Wu Sun;  Daphne Szutu;  Kentaro Takagi;  Masahiro Takagi;  Munemasa Teramoto;  Mark G. Tjoelker;  Susan Trumbore;  Masahito Ueyama;  Rodrigo Vargas;  Ruth K. Varner;  Joseph Verfaillie;  Christoph Vogel;  Jinsong Wang;  Greg Winston;  Tana E. Wood;  Juying Wu;  Thomas Wutzler;  Jiye Zeng;  Tianshan Zha;  Quan Zhang;  Junliang Zou
收藏  |  浏览/下载:15/0  |  提交时间:2020/10/12
Representing the function and sensitivity of coastal interfaces in Earth system models 期刊论文
NATURE COMMUNICATIONS, 2020, 11 (1)
作者:  Ward, Nicholas D.;  Megonigal, J. Patrick;  Bond-Lamberty, Ben;  Bailey, Vanessa L.;  Butman, David;  Canuel, Elizabeth A.;  Diefenderfer, Heida;  Ganju, Neil K.;  Goni, Miguel A.;  Graham, Emily B.;  Hopkinson, Charles S.;  Khangaonkar, Tarang;  Langley, J. Adam;  McDowell, Nate G.;  Myers-Pigg, Allison N.;  Neumann, Rebecca B.;  Osburn, Christopher L.;  Price, Rene M.;  Rowland, Joel;  Sengupta, Aditi;  Simard, Marc;  Thornton, Peter E.;  Tzortziou, Maria;  Vargas, Rodrigo;  Weisenhorn, Pamela B.;  Windham-Myers, Lisamarie
收藏  |  浏览/下载:13/0  |  提交时间:2020/05/20
Global airborne sampling reveals a previously unobserved dimethyl sulfide oxidation mechanism in the marine atmosphere 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (9) : 4505-4510
作者:  Veres, Patrick R.;  Neuman, J. Andrew;  Bertram, Timothy H.;  Assaf, Emmanuel;  Wolfe, Glenn M.;  Williamson, Christina J.;  Weinzierl, Bernadett;  Tilmes, Simone;  Thompson, Chelsea R.;  Thames, Alexander B.;  Schroder, Jason C.;  Saiz-Lopez, Alfonso;  Rollins, Andrew W.;  Roberts, James M.;  Price, Derek;  Peischl, Jeff;  Nault, Benjamin A.;  Moller, Kristian H.;  Miller, David O.;  Meinardi, Simone;  Li, Qinyi;  Lamarque, Jean-Francois;  Kupc, Agnieszka;  Kjaergaard, Henrik G.;  Kinnison, Douglas;  Jimenez, Jose L.;  Jernigan, Christopher M.;  Hornbrook, Rebecca S.;  Hills, Alan;  Dollner, Maximilian;  Day, Douglas A.;  Cuevas, Carlos A.;  Campuzano-Jost, Pedro;  Burkholder, James;  Bui, T. Paul;  Brune, William H.;  Brown, Steven S.;  Brock, Charles A.;  Bourgeois, Ilann;  Blake, Donald R.;  Apel, Eric C.;  Ryerson, Thomas B.
收藏  |  浏览/下载:23/0  |  提交时间:2020/05/13
dimethyl sulfide  marine sulfur  autoxidation  marine aerosols  aerosol sulfate  
Complete biosynthesis of cannabinoids and their unnatural analogues in yeast (2019) (vol 567, pg 123, 2019) 期刊论文
NATURE, 2020, 580 (7802) : E2-E2
作者:  Wang, Fei;  Wang, Kaiyu;  Forknall, Nora;  Patrick, Christopher;  Yang, Tansy;  Parekh, Ruchi;  Bock, Davi;  Dickson, Barry J.
收藏  |  浏览/下载:7/0  |  提交时间:2020/07/03

An amendment to this paper has been published and can be accessed via a link at the top of the paper.


  
The molecular basis for sugar import in malaria parasites 期刊论文
NATURE, 2020, 578 (7794) : 321-+
作者:  Zhao, Peishen;  Liang, Yi-Lynn;  Belousoff, Matthew J.;  Deganutti, Giuseppe;  Fletcher, Madeleine M.;  Willard, Francis S.;  Bell, Michael G.;  Christe, Michael E.;  Sloop, Kyle W.;  Inoue, Asuka;  Truong, Tin T.;  Clydesdale, Lachlan;  Furness, Sebastian G. B.;  Christopoulos, Arthur;  Wang, Ming-Wei;  Miller, Laurence J.;  Reynolds, Christopher A.;  Danev, Radostin;  Sexton, Patrick M.;  Wootten, Denise
收藏  |  浏览/下载:19/0  |  提交时间:2020/07/03

Elucidating the mechanism of sugar import requires a molecular understanding of how transporters couple sugar binding and gating events. Whereas mammalian glucose transporters (GLUTs) are specialists(1), the hexose transporter from the malaria parasite Plasmodium falciparum PfHT1(2,3) has acquired the ability to transport both glucose and fructose sugars as efficiently as the dedicated glucose (GLUT3) and fructose (GLUT5) transporters. Here, to establish the molecular basis of sugar promiscuity in malaria parasites, we determined the crystal structure of PfHT1 in complex with d-glucose at a resolution of 3.6 angstrom. We found that the sugar-binding site in PfHT1 is very similar to those of the distantly related GLUT3 and GLUT5 structures(4,5). Nevertheless, engineered PfHT1 mutations made to match GLUT sugar-binding sites did not shift sugar preferences. The extracellular substrate-gating helix TM7b in PfHT1 was positioned in a fully occluded conformation, providing a unique glimpse into how sugar binding and gating are coupled. We determined that polar contacts between TM7b and TM1 (located about 15 angstrom from d-glucose) are just as critical for transport as the residues that directly coordinate d-glucose, which demonstrates a strong allosteric coupling between sugar binding and gating. We conclude that PfHT1 has achieved substrate promiscuity not by modifying its sugar-binding site, but instead by evolving substrate-gating dynamics.


Crystal structure of the Plasmodium falciparum hexose transporter PfHT1 reveals the molecular basis of its ability to transport multiple types of sugar as efficiently as the dedicated mammalian glucose and fructose transporters.


  
Processive extrusion of polypeptide loops by a Hsp100 disaggregase 期刊论文
NATURE, 2020, 578 (7794) : 317-+
作者:  Zhao, Peishen;  Liang, Yi-Lynn;  Belousoff, Matthew J.;  Deganutti, Giuseppe;  Fletcher, Madeleine M.;  Willard, Francis S.;  Bell, Michael G.;  Christe, Michael E.;  Sloop, Kyle W.;  Inoue, Asuka;  Truong, Tin T.;  Clydesdale, Lachlan;  Furness, Sebastian G. B.;  Christopoulos, Arthur;  Wang, Ming-Wei;  Miller, Laurence J.;  Reynolds, Christopher A.;  Danev, Radostin;  Sexton, Patrick M.;  Wootten, Denise
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The ability to reverse protein aggregation is vital to cells(1,2). Hsp100 disaggregases such as ClpB and Hsp104 are proposed to catalyse this reaction by translocating polypeptide loops through their central pore(3,4). This model of disaggregation is appealing, as it could explain how polypeptides entangled within aggregates can be extracted and subsequently refolded with the assistance of Hsp70(4,5). However, the model is also controversial, as the necessary motor activity has not been identified(6-8) and recent findings indicate non-processive mechanisms such as entropic pulling or Brownian ratcheting(9,10). How loop formation would be accomplished is also obscure. Indeed, cryo-electron microscopy studies consistently show single polypeptide strands in the Hsp100 pore(11,12). Here, by following individual ClpB-substrate complexes in real time, we unambiguously demonstrate processive translocation of looped polypeptides. We integrate optical tweezers with fluorescent-particle tracking to show that ClpB translocates both arms of the loop simultaneously and switches to single-arm translocation when encountering obstacles. ClpB is notably powerful and rapid  it exerts forces of more than 50 pN at speeds of more than 500 residues per second in bursts of up to 28 residues. Remarkably, substrates refold while exiting the pore, analogous to co-translational folding. Our findings have implications for protein-processing phenomena including ubiquitin-mediated remodelling by Cdc48 (or its mammalian orthologue p97)(13) and degradation by the 26S proteasome(14).


A combination of optical tweezers and fluorescent-particle tracking is used to dissect the dynamics of the Hsp100 disaggregase ClpB, and show that the processive extrusion of polypeptide loops is the mechanistic basis of its activity.