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The coding and long noncoding single-cell atlas of the developing human fetal striatum 期刊论文
Science, 2021
作者:  Vittoria Dickinson Bocchi;  Paola Conforti;  Elena Vezzoli;  Dario Besusso;  Claudio Cappadona;  Tiziana Lischetti;  Maura Galimberti;  Valeria Ranzani;  Raoul J. P. Bonnal;  Marco De Simone;  Grazisa Rossetti;  Xiaoling He;  Kenji Kamimoto;  Ira Espuny-Camacho;  Andrea Faedo;  Federica Gervasoni;  Romina Vuono;  Samantha A. Morris;  Jian Chen;  Dan Felsenfeld;  Giulio Pavesi;  Roger A. Barker;  Massimiliano Pagani;  Elena Cattaneo
收藏  |  浏览/下载:9/0  |  提交时间:2021/05/14
Inborn errors of type I IFN immunity in patients with life-threatening COVID-19 期刊论文
Science, 2020
作者:  Qian Zhang;  Paul Bastard;  Zhiyong Liu;  Jérémie Le Pen;  Marcela Moncada-Velez;  Jie Chen;  Masato Ogishi;  Ira K. D. Sabli;  Stephanie Hodeib;  Cecilia Korol;  Jérémie Rosain;  Kaya Bilguvar;  Junqiang Ye;  Alexandre Bolze;  Benedetta Bigio;  Rui Yang;  Andrés Augusto Arias;  Qinhua Zhou;  Yu Zhang;  Fanny Onodi;  Sarantis Korniotis;  Léa Karpf;  Quentin Philippot;  Marwa Chbihi;  Lucie Bonnet-Madin;  Karim Dorgham;  Nikaïa Smith;  William M. Schneider;  Brandon S. Razooky;  Hans-Heinrich Hoffmann;  Eleftherios Michailidis;  Leen Moens;  Ji Eun Han;  Lazaro Lorenzo;  Lucy Bizien;  Philip Meade;  Anna-Lena Neehus;  Aileen Camille Ugurbil;  Aurélien Corneau;  Gaspard Kerner;  Peng Zhang;  Franck Rapaport;  Yoann Seeleuthner;  Jeremy Manry;  Cecile Masson;  Yohann Schmitt;  Agatha Schlüter;  Tom Le Voyer;  Taushif Khan;  Juan Li;  Jacques Fellay;  Lucie Roussel;  Mohammad Shahrooei;  Mohammed F. Alosaimi;  Davood Mansouri;  Haya Al-Saud;  Fahd Al-Mulla;  Feras Almourfi;  Saleh Zaid Al-Muhsen;  Fahad Alsohime;  Saeed Al Turki;  Rana Hasanato;  Diederik van de Beek;  Andrea Biondi;  Laura Rachele Bettini;  Mariella D’Angio’;  Paolo Bonfanti;  Luisa Imberti;  Alessandra Sottini;  Simone Paghera;  Eugenia Quiros-Roldan;  Camillo Rossi;  Andrew J. Oler;  Miranda F. Tompkins;  Camille Alba;  Isabelle Vandernoot;  Jean-Christophe Goffard;  Guillaume Smits;  Isabelle Migeotte;  Filomeen Haerynck;  Pere Soler-Palacin;  Andrea Martin-Nalda;  Roger Colobran;  Pierre-Emmanuel Morange;  Sevgi Keles;  Fatma Çölkesen;  Tayfun Ozcelik;  Kadriye Kart Yasar;  Sevtap Senoglu;  Şemsi Nur Karabela;  Carlos Rodríguez-Gallego;  Giuseppe Novelli;  Sami Hraiech;  Yacine Tandjaoui-Lambiotte;  Xavier Duval;  Cédric Laouénan;  COVID-STORM Clinicians†;  COVID Clinicians†;  Imagine COVID Group†;  French COVID Cohort Study Group†;  CoV-Contact Cohort†;  Amsterdam UMC Covid-19 Biobank†;  COVID Human Genetic Effort†;  NIAID-USUHS/TAGC COVID Immunity Group†;  Andrew L. Snow;  Clifton L. Dalgard;  Joshua D. Milner;  Donald C. Vinh;  Trine H. Mogensen;  Nico Marr;  András N. Spaan;  Bertrand Boisson;  Stéphanie Boisson-Dupuis;  Jacinta Bustamante;  Anne Puel;  Michael J. Ciancanelli;  Isabelle Meyts;  Tom Maniatis;  Vassili Soumelis;  Ali Amara;  Michel Nussenzweig;  Adolfo García-Sastre;  Florian Krammer;  Aurora Pujol;  Darragh Duffy;  Richard P. Lifton;  Shen-Ying Zhang;  Guy Gorochov;  Vivien Béziat;  Emmanuelle Jouanguy;  Vanessa Sancho-Shimizu;  Charles M. Rice;  Laurent Abel;  Luigi D. Notarangelo;  Aurélie Cobat;  Helen C. Su;  Jean-Laurent Casanova
收藏  |  浏览/下载:23/0  |  提交时间:2020/10/26
Origin of complexity in haemoglobin evolution 期刊论文
NATURE, 2020
作者:  Cheema, Suraj S.;  Kwon, Daewoong;  Shanker, Nirmaan;  dos Reis, Roberto;  Hsu, Shang-Lin;  Xiao, Jun;  Zhang, Haigang;  Wagner, Ryan;  Datar, Adhiraj;  McCarter, Margaret R.;  Serrao, Claudy R.;  Yadav, Ajay K.;  Karbasian, Golnaz;  Hsu, Cheng-Hsiang;  Tan, Ava J.;  Wang, Li-Chen;  Thakare, Vishal;  Zhang, Xiang;  Mehta, Apurva;  Karapetrova, Evguenia;  Chopdekar, Rajesh, V;  Shafer, Padraic;  Arenholz, Elke;  Hu, Chenming;  Proksch, Roger;  Ramesh, Ramamoorthy;  Ciston, Jim;  Salahuddin, Sayeef
收藏  |  浏览/下载:52/0  |  提交时间:2020/07/03

Most proteins associate into multimeric complexes with specific architectures(1,2), which often have functional properties such as cooperative ligand binding or allosteric regulation(3). No detailed knowledge is available about how any multimer and its functions arose during evolution. Here we use ancestral protein reconstruction and biophysical assays to elucidate the origins of vertebrate haemoglobin, a heterotetramer of paralogous alpha- and beta-subunits that mediates respiratory oxygen transport and exchange by cooperatively binding oxygen with moderate affinity. We show that modern haemoglobin evolved from an ancient monomer and characterize the historical '  missing link'  through which the modern tetramer evolved-a noncooperative homodimer with high oxygen affinity that existed before the gene duplication that generated distinct alpha- and beta-subunits. Reintroducing just two post-duplication historical substitutions into the ancestral protein is sufficient to cause strong tetramerization by creating favourable contacts with more ancient residues on the opposing subunit. These surface substitutions markedly reduce oxygen affinity and even confer cooperativity, because an ancient linkage between the oxygen binding site and the multimerization interface was already an intrinsic feature of the protein'  s structure. Our findings establish that evolution can produce new complex molecular structures and functions via simple genetic mechanisms that recruit existing biophysical features into higher-level architectures.


Experimental analysis of reconstructed ancestral globins reveals that haemoglobin'  s complex tetrameric structure and oxygen-binding functions evolved by simple genetic and biophysical mechanisms.


  
Intrinsic apoptosis shapes the tumor spectrum linked to inactivation of the deubiquitinase BAP1 期刊论文
SCIENCE, 2019, 364 (6437) : 283-+
作者:  He, Meng;  Chaurushiya, Mira S.;  Webster, Joshua D.;  Kummerfeld, Sarah;  Reja, Rohit;  Chaudhuri, Subhra;  Chen, Ying-Jiun;  Modrusan, Zora;  Haley, Benjamin;  Dugger, Debra L.;  Eastham-Anderson, Jeffrey;  Lau, Shari;  Dey, Anwesha;  Caothien, Roger;  Roose-Girma, Merone;  Newton, Kim;  Dixit, Vishva M.
收藏  |  浏览/下载:9/0  |  提交时间:2019/11/27
Inference of the impact of wildfire on permafrost and active layer thickness in a discontinuous permafrost region using the remotely sensed active layer thickness (ReSALT) algorithm 期刊论文
ENVIRONMENTAL RESEARCH LETTERS, 2019, 14 (3)
作者:  Michaelides, Roger J.;  Schaefer, Kevin;  Zebker, Howard A.;  Parsekian, Andrew;  Liu, Lin;  Chen, Jingyi;  Natali, Susan;  Ludwig, Sarah;  Schaefer, Sean R.
收藏  |  浏览/下载:11/0  |  提交时间:2019/04/09
permafrost  wildfire  InSAR  radar remote sensing  geophysics  active layer  Arctic  
How behavioral and geographic heterogeneity affects economic and environmental benefits of efficient appliances 期刊论文
ENERGY POLICY, 2019, 125: 537-547
作者:  Sekar, Ashok;  Williams, Eric;  Hittinger, Eric;  Chen, Roger
收藏  |  浏览/下载:5/0  |  提交时间:2019/04/09
ENERGY STAR  Rebates  Efficiency program  Policy  Heterogeneity  Behavior  
Biodiversity redistribution under climate change: Impacts on ecosystems and human well-being 期刊论文
SCIENCE, 2017, 355 (6332)
作者:  Pecl, Gretta T.;  Araujo, Miguel B.;  Bell, Johann D.;  Blanchard, Julia;  Bonebrake, Timothy C.;  Chen, I-Ching;  Clark, Timothy D.;  Colwell, Robert K.;  Danielsen, Finn;  Evengard, Birgitta;  Falconi, Lorena;  Ferrier, Simon;  Frusher, Stewart;  Garcia, Raquel A.;  Griffis, Roger B.;  Hobday, Alistair J.;  Janion-Scheepers, Charlene;  Jarzyna, Marta A.;  Jennings, Sarah;  Lenoir, Jonathan;  Linnetved, Hlif I.;  Martin, Victoria Y.;  McCormack, Phillipa C.;  McDonald, Jan;  Mitchell, Nicola J.;  Mustonen, Tero;  Pandolfi, John M.;  Pettorelli, Nathalie;  Popova, Ekaterina;  Robinson, Sharon A.;  Scheffers, Brett R.;  Shaw, Justine D.;  Sorte, Cascade J. B.;  Strugnell, Jan M.;  Sunday, Jennifer M.;  Tuanmu, Mao-Ning;  Verges, Adriana;  Villanueva, Cecilia;  Wernberg, Thomas;  Wapstra, Erik;  Williams, Stephen E.
收藏  |  浏览/下载:32/0  |  提交时间:2019/11/27