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Energy systems in scenarios at net-zero CO2 emissions 期刊论文
Nature Communications, 2021
作者:  DeAngelo, Julianne;  Azevedo, Inê;  s;  Bistline, John;  Clarke, Leon;  Luderer, Gunnar;  Byers, Edward;  Davis, Steven J.
收藏  |  浏览/下载:20/0  |  提交时间:2021/11/15
Haplotype-resolved diverse human genomes and integrated analysis of structural variation 期刊论文
Science, 2021
作者:  Peter Ebert;  Peter A. Audano;  Qihui Zhu;  Bernardo Rodriguez-Martin;  David Porubsky;  Marc Jan Bonder;  Arvis Sulovari;  Jana Ebler;  Weichen Zhou;  Rebecca Serra Mari;  Feyza Yilmaz;  Xuefang Zhao;  PingHsun Hsieh;  Joyce Lee;  Sushant Kumar;  Jiadong Lin;  Tobias Rausch;  Yu Chen;  Jingwen Ren;  Martin Santamarina;  Wolfram Höps;  Hufsah Ashraf;  Nelson T. Chuang;  Xiaofei Yang;  Katherine M. Munson;  Alexandra P. Lewis;  Susan Fairley;  Luke J. Tallon;  Wayne E. Clarke;  Anna O. Basile;  Marta Byrska-Bishop;  André Corvelo;  Uday S. Evani;  Tsung-Yu Lu;  Mark J. P. Chaisson;  Junjie Chen;  Chong Li;  Harrison Brand;  Aaron M. Wenger;  Maryam Ghareghani;  William T. Harvey;  Benjamin Raeder;  Patrick Hasenfeld;  Allison A. Regier;  Haley J. Abel;  Ira M. Hall;  Paul Flicek;  Oliver Stegle;  Mark B. Gerstein;  Jose M. C. Tubio;  Zepeng Mu;  Yang I. Li;  Xinghua Shi;  Alex R. Hastie;  Kai Ye;  Zechen Chong;  Ashley D. Sanders;  Michael C. Zody;  Michael E. Talkowski;  Ryan E. Mills;  Scott E. Devine;  Charles Lee;  Jan O. Korbel;  Tobias Marschall;  Evan E. Eichler
收藏  |  浏览/下载:65/0  |  提交时间:2021/04/06
Quantifying and addressing the prevalence and bias of study designs in the environmental and social sciences 期刊论文
Nature Communications, 2020
作者:  Alec P. Christie;  David Abecasis;  Mehdi Adjeroud;  Juan C. Alonso;  Tatsuya Amano;  Alvaro Anton;  Barry P. Baldigo;  Rafael Barrientos;  Jake E. Bicknell;  Deborah A. Buhl;  Just Cebrian;  Ricardo S. Ceia;  Luciana Cibils-Martina;  Sarah Clarke;  Joachim Claudet;  Michael D. Craig;  Dominique Davoult;  Annelies De Backer;  Mary K. Donovan;  Tyler D. Eddy;  Filipe M. Franç;  a;  Jonathan P. A. Gardner;  Bradley P. Harris;  Ari Huusko;  Ian L. Jones;  Brendan P. Kelaher;  Janne S. Kotiaho;  Adrià;  ;  pez-Baucells;  Heather L. Major;  Aki Mä;  ki-Petä;  ys;  Beatriz Martí;  n;  Carlos A. Martí;  n;  Philip A. Martin;  Daniel Mateos-Molina;  Robert A. McConnaughey;  Michele Meroni;  Christoph F. J. Meyer;  Kade Mills;  Monica Montefalcone;  Norbertas Noreika;  Carlos Palací;  n;  Anjali Pande;  C. Roland Pitcher;  Carlos Ponce;  Matt Rinella;  Ricardo Rocha;  Marí;  a C. Ruiz-Delgado;  Juan J. Schmitter-Soto;  Jill A. Shaffer;  Shailesh Sharma;  Anna A. Sher;  Doriane Stagnol;  Thomas R. Stanley;  Kevin D. E. Stokesbury;  Aurora Torres;  Oliver Tully;  Teppo Vehanen;  Corinne Watts;  Qingyuan Zhao;  William J. Sutherland
收藏  |  浏览/下载:51/0  |  提交时间:2020/12/22
Viral epitope profiling of COVID-19 patients reveals cross-reactivity and correlates of severity 期刊论文
Science, 2020
作者:  Ellen Shrock;  Eric Fujimura;  Tomasz Kula;  Richard T. Timms;  I-Hsiu Lee;  Yumei Leng;  Matthew L. Robinson;  Brandon M. Sie;  Mamie Z. Li;  Yuezhou Chen;  Jennifer Logue;  Adam Zuiani;  Denise McCulloch;  Felipe J. N. Lelis;  Stephanie Henson;  Daniel R. Monaco;  Meghan Travers;  Shaghayegh Habibi;  William A. Clarke;  Patrizio Caturegli;  Oliver Laeyendecker;  Alicja Piechocka-Trocha;  Jonathan Z. Li;  Ashok Khatri;  Helen Y. Chu;  MGH COVID-19 Collection &;  amp;  Processing Team16‡;  Alexandra-Chloé Villani;  Kyle Kays;  Marcia B. Goldberg;  Nir Hacohen;  Michael R. Filbin;  Xu G. Yu;  Bruce D. Walker;  Duane R. Wesemann;  H. Benjamin Larman;  James A. Lederer;  Stephen J. Elledge
收藏  |  浏览/下载:33/0  |  提交时间:2020/11/30
Fusing subnational with national climate action is central to decarbonization: the case of the United States 期刊论文
Nature Communications, 2020
作者:  Nathan E. Hultman;  Leon Clarke;  Carla Frisch;  Kevin Kennedy;  Haewon McJeon;  Tom Cyrs;  Pete Hansel;  Paul Bodnar;  Michelle Manion;  Morgan R. Edwards;  Ryna Cui;  Christina Bowman;  Jessie Lund;  Michael I. Westphal;  Andrew Clapper;  Joel Jaeger;  Arijit Sen;  Jiehong Lou;  Devashree Saha;  Wendy Jaglom;  Koben Calhoun;  Kristin Igusky;  James deWeese;  Kareem Hammoud;  J. C. Altimirano;  Margaret Dennis;  Chris Henderson;  Gill Zwicker;  John O’;  Neill
收藏  |  浏览/下载:38/0  |  提交时间:2020/10/20
Rapidly-migrating and internally-generated knickpoints can control submarine channel evolution 期刊论文
NATURE COMMUNICATIONS, 2020, 11 (1)
作者:  Heijnen, Maarten S.;  Clare, Michael A.;  Cartigny, Matthieu J. B.;  Talling, Peter J.;  Hage, Sophie;  Lintern, D. Gwyn;  Stacey, Cooper;  Parsons, Daniel R.;  Simmons, Stephen M.;  Chen, Ye;  Sumner, Esther J.;  Dix, Justin K.;  Clarke, John E. Hughes
收藏  |  浏览/下载:29/0  |  提交时间:2020/06/22
Not all driver mutations are equal 期刊论文
NATURE, 2020, 580 (7805) : 595-596
作者:  Legendre, Lucas J.;  Rubilar-Rogers, David;  Musser, Grace M.;  Davis, Sarah N.;  Otero, Rodrigo A.;  Vargas, Alexander O.;  Clarke, Julia A.
收藏  |  浏览/下载:28/0  |  提交时间:2020/07/03

A study of cancer-associated mutations in normal endometrial glands of the uterus has now been performed using whole-genome sequencing. The analysis sheds light on the early changes that lead to invasive disease.


  
Skeleton of a Cretaceous mammal from Madagascar reflects long-term insularity 期刊论文
NATURE, 2020
作者:  Petit, L.;  Eenink, H. G. J.;  Russ, M.;  Lawrie, W. I. L.;  Hendrickx, N. W.;  Philips, S. G. J.;  Clarke, J. S.;  Vandersypen, L. M. K.;  Veldhorst, M.
收藏  |  浏览/下载:20/0  |  提交时间:2020/05/13

The fossil record of mammaliaforms (mammals and their closest relatives) of the Mesozoic era from the southern supercontinent Gondwana is far less extensive than that from its northern counterpart, Laurasia(1,2). Among Mesozoic mammaliaforms, Gondwanatheria is one of the most poorly known clades, previously represented by only a single cranium and isolated jaws and teeth(1-5). As a result, the anatomy, palaeobiology and phylogenetic relationships of gondwanatherians remain unclear. Here we report the discovery of an articulated and very well-preserved skeleton of a gondwanatherian of the latest age (72.1-66 million years ago) of the Cretaceous period from Madagascar that we assign to a new genus and species, Adalatherium hui. To our knowledge, the specimen is the most complete skeleton of a Gondwanan Mesozoic mammaliaform that has been found, and includes the only postcranial material and ascending ramus of the dentary known for any gondwanatherian. A phylogenetic analysis including the new taxon recovers Gondwanatheria as the sister group to Multituberculata. The skeleton, which represents one of the largest of the Gondwanan Mesozoic mammaliaforms, is particularly notable for exhibiting many unique features in combination with features that are convergent on those of therian mammals. This uniqueness is consistent with a lineage history for A. hui of isolation on Madagascar for more than 20 million years.


Adalatherium hui, a newly discovered gondwanatherian mammal from Madagascar dated to near the end of the Cretaceous period, shows features consistent with a long evolutionary trajectory of isolation in an insular environment.


  
Human settlement of East Polynesia earlier, incremental, and coincident with prolonged South Pacific drought 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (16) : 8813-8819
作者:  Sear, David A.;  Allen, Melinda S.;  Hassall, Jonathan D.;  Maloney, Ashley E.;  Langdon, Peter G.;  Morrison, Alex E.;  Henderson, Andrew C. G.;  Mackay, Helen;  Croudace, Ian W.;  Clarke, Charlotte;  Sachs, Julian P.;  Macdonald, Georgiana;  Chiverrell, Richard C.;  Leng, Melanie J.;  Cisneros-Dozal, L. M.;  Fonville, Thierry
收藏  |  浏览/下载:35/0  |  提交时间:2020/05/13
Polynesian voyaging  East Polynesian colonization  biomarkers  drought  palaeoclimate  
Two conserved epigenetic regulators prevent healthy ageing 期刊论文
NATURE, 2020
作者:  Yoshida, Kenichi;  Gowers, Kate H. C.;  Lee-Six, Henry;  Chandrasekharan, Deepak P.;  Coorens, Tim;  Maughan, Elizabeth F.;  Beal, Kathryn;  Menzies, Andrew;  Millar, Fraser R.;  Anderson, Elizabeth;  Clarke, Sarah E.;  Pennycuick, Adam;  Thakrar, Ricky M.;  Butler, Colin R.;  Kakiuchi, Nobuyuki;  Hirano, Tomonori;  Hynds, Robert E.;  Stratton, Michael R.;  Martincorena, Inigo;  Janes, Sam M.;  Campbell, Peter J.
收藏  |  浏览/下载:68/0  |  提交时间:2020/07/03

It has long been assumed that lifespan and healthspan correlate strongly, yet the two can be clearly dissociated(1-6). Although there has been a global increase in human life expectancy, increasing longevity is rarely accompanied by an extended healthspan(4,7). Thus, understanding the origin of healthy behaviours in old people remains an important and challenging task. Here we report a conserved epigenetic mechanism underlying healthy ageing. Through genome-wide RNA-interference-based screening of genes that regulate behavioural deterioration in ageing Caenorhabditis elegans, we identify 59 genes as potential modulators of the rate of age-related behavioural deterioration. Among these modulators, we found that a neuronal epigenetic reader, BAZ-2, and a neuronal histone 3 lysine 9 methyltransferase, SET-6, accelerate behavioural deterioration in C. elegans by reducing mitochondrial function, repressing the expression of nuclear-encoded mitochondrial proteins. This mechanism is conserved in cultured mouse neurons and human cells. Examination of human databases(8,9) shows that expression of the human orthologues of these C. elegans regulators, BAZ2B and EHMT1, in the frontal cortex increases with age and correlates positively with the progression of Alzheimer'  s disease. Furthermore, ablation of Baz2b, the mouse orthologue of BAZ-2, attenuates age-dependent body-weight gain and prevents cognitive decline in ageing mice. Thus our genome-wide RNA-interference screen in C. elegans has unravelled conserved epigenetic negative regulators of ageing, suggesting possible ways to achieve healthy ageing.


Two epigenetic regulators-identified in an RNA interference screen in Caenhorhabditis elegans, and conserved in mammals-diminish mitochondrial function and accelerate the age-related deterioration of behaviour.