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Conjugate effect of the 2011 Tohoku reflected tsunami-driven gravity waves in the ionosphere 期刊论文
Geophysical Research Letters, 2022
作者:  Min-Yang Chou;  Jia Yue;  Charles C. H. Lin;  P. K. Rajesh;  N. M. Pedatella
收藏  |  浏览/下载:19/0  |  提交时间:2022/01/29
Seismological rockslide warnings in the Himalaya 期刊论文
Science, 2021
作者:  N. Purnachandra Rao;  Rajesh Rekapalli;  D. Srinagesh;  V. M. Tiwari;  Niels Hovius;  Kristen L. Cook;  Michael Dietze
收藏  |  浏览/下载:8/0  |  提交时间:2021/04/20
Low frequency radio observations of the ‘quiet’ corona during the descending phase of sunspot cycle 24 期刊论文
Geophysical Research Letters, 2020
作者:  R. Ramesh;  A. Kumari;  C. Kathiravan;  D. Ketaki;  M. Rajesh;  M. Vrunda
收藏  |  浏览/下载:6/0  |  提交时间:2020/09/14
Bile acid metabolites control T(H)17 and T-reg cell differentiation (vol 576, pg 148, 2019) 期刊论文
NATURE, 2020, 579 (7798) : E7-E7
作者:  Su, Jie;  Morgani, Sophie M.;  David, Charles J.;  Wang, Qiong;  Er, Ekrem Emrah;  Huang, Yun-Han;  Basnet, Harihar;  Zou, Yilong;  Shu, Weiping;  Soni, Rajesh K.;  Hendrickson, Ronald C.;  Hadjantonakis, Anna-Katerina;  Massague, Joan
收藏  |  浏览/下载:11/0  |  提交时间:2020/07/03
TGF-beta orchestrates fibrogenic and developmental EMTs via the RAS effector RREB1 期刊论文
NATURE, 2020, 577 (7791) : 566-+
作者:  Su, Jie;  Morgani, Sophie M.;  David, Charles J.;  Wang, Qiong;  Er, Ekrem Emrah;  Huang, Yun-Han;  Basnet, Harihar;  Zou, Yilong;  Shu, Weiping;  Soni, Rajesh K.;  Hendrickson, Ronald C.;  Hadjantonakis, Anna-Katerina;  Massague, Joan
收藏  |  浏览/下载:8/0  |  提交时间:2020/07/03

Epithelial-to-mesenchymal transitions (EMTs) are phenotypic plasticity processes that confer migratory and invasive properties to epithelial cells during development, wound-healing, fibrosis and cancer(1-4). EMTs are driven by SNAIL, ZEB and TWIST transcription factors(5,6) together with microRNAs that balance this regulatory network(7,8). Transforming growth factor beta (TGF-beta) is a potent inducer of developmental and fibrogenic EMTs4,9,10. Aberrant TGF-beta signalling and EMT are implicated in the pathogenesis of renal fibrosis, alcoholic liver disease, non-alcoholic steatohepatitis, pulmonary fibrosis and cancer(4,11). TGF-beta depends on RAS and mitogen-activated protein kinase (MAPK) pathway inputs for the induction of EMTs12-19. Here we show how these signals coordinately trigger EMTs and integrate them with broader pathophysiological processes. We identify RAS-responsive element binding protein 1 (RREB1), a RAS transcriptional effector(20,21), as a key partner of TGF-beta-activated SMAD transcription factors in EMT. MAPK-activated RREB1 recruits TGF-beta-activated SMAD factors to SNAIL. Context-dependent chromatin accessibility dictates the ability of RREB1 and SMAD to activate additional genes that determine the nature of the resulting EMT. In carcinoma cells, TGF-beta-SMAD and RREB1 directly drive expression of SNAIL and fibrogenic factors stimulating myofibroblasts, promoting intratumoral fibrosis and supporting tumour growth. In mouse epiblast progenitors, Nodal-SMAD and RREB1 combine to induce expression of SNAIL and mesendoderm-differentiation genes that drive gastrulation. Thus, RREB1 provides a molecular link between RAS and TGF-beta pathways for coordinated induction of developmental and fibrogenic EMTs. These insights increase our understanding of the regulation of epithelial plasticity and its pathophysiological consequences in development, fibrosis and cancer.


RAS and TGF-beta pathways regulate distinct modes of epithelial-to-mesenchymal transition via RAS-responsive element binding protein 1.


  
Giant virus diversity and host interactions through global metagenomics 期刊论文
NATURE, 2020: 1-+
作者:  Su, Jie;  Morgani, Sophie M.;  David, Charles J.;  Wang, Qiong;  Er, Ekrem Emrah;  Huang, Yun-Han;  Basnet, Harihar;  Zou, Yilong;  Shu, Weiping;  Soni, Rajesh K.;  Hendrickson, Ronald C.;  Hadjantonakis, Anna-Katerina;  Massague, Joan
收藏  |  浏览/下载:21/0  |  提交时间:2020/07/03

Analysis of metagenomics data revealed that large and giant viruses are globally widely distributed and are associated with most major eukaryotic lineages.


Our current knowledge about nucleocytoplasmic large DNA viruses (NCLDVs) is largely derived from viral isolates that are co-cultivated with protists and algae. Here we reconstructed 2,074 NCLDV genomes from sampling sites across the globe by building on the rapidly increasing amount of publicly available metagenome data. This led to an 11-fold increase in phylogenetic diversity and a parallel 10-fold expansion in functional diversity. Analysis of 58,023 major capsid proteins from large and giant viruses using metagenomic data revealed the global distribution patterns and cosmopolitan nature of these viruses. The discovered viral genomes encoded a wide range of proteins with putative roles in photosynthesis and diverse substrate transport processes, indicating that host reprogramming is probably a common strategy in the NCLDVs. Furthermore, inferences of horizontal gene transfer connected viral lineages to diverse eukaryotic hosts. We anticipate that the global diversity of NCLDVs that we describe here will establish giant viruses-which are associated with most major eukaryotic lineages-as important players in ecosystems across Earth'  s biomes.


  
DNA methylation as a mediator of HLA-DRB1(star)15:01 and a protective variant in multiple sclerosis 期刊论文
NATURE COMMUNICATIONS, 2018, 9
作者:  Kular, Lara;  Liu, Yun;  Ruhrmann, Sabrina;  Zheleznyakova, Galina;  Marabita, Francesco;  Gomez-Cabrero, David;  James, Tojo;  Ewing, Ewoud;  Linden, Magdalena;  Gornikiewicz, Bartosz;  Aeinehband, Shahin;  Stridh, Pernilla;  Link, Jenny;  Andlauer, Till F. M.;  Gasperi, Christiane;  Wiendl, Heinz;  Zipp, Frauke;  Gold, Ralf;  Tackenberg, Bjoern;  Weber, Frank;  Hemmer, Bernhard;  Strauch, Konstantin;  Heilmann-Heimbach, Stefanie;  Rawal, Rajesh;  Schminke, Ulf;  Schmidt, Carsten O.;  Kacprowski, Tim;  Franke, Andre;  Laudes, Matthias;  Dilthey, Alexander T.;  Celius, Elisabeth G.;  Sondergaard, Helle B.;  Tegner, Jesper;  Harbo, Hanne F.;  Oturai, Annette B.;  Olafsson, Sigurgeir;  Eggertsson, Hannes P.;  Halldorsson, Bjarni V.;  Hjaltason, Haukur;  Olafsson, Elias;  Jonsdottir, Ingileif;  Stefansson, Kari;  Olsson, Tomas;  Piehl, Fredrik;  Ekstroem, Tomas J.;  Kockum, Ingrid;  Feinberg, Andrew P.;  Jagodic, Maja
收藏  |  浏览/下载:8/0  |  提交时间:2019/11/27
Toward Improving Short-Term Predictions of Fine Particulate Matter Over the United States Via Assimilation of Satellite Aerosol Optical Depth Retrievals 期刊论文
JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES, 2019, 124 (5) : 2753-2773
作者:  Kumar, Rajesh;  Delle Monache, Luca;  Bresch, Jamie;  Saide, Pablo E.;  Tang, Youhua;  Liu, Zhiquan;  da Silva, Arlindo M.;  Alessandrini, Stefano;  Pfister, Gabriele;  Edwards, David;  Lee, Pius;  Djalalova, Irina
收藏  |  浏览/下载:11/0  |  提交时间:2019/11/26
air quality  PM2.5  CMAQ  GSI  MODIS AOD  
Sources of Black Carbon Deposition to the Himalayan Glaciers in Current and Future climates 期刊论文
JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES, 2018, 123 (14) : 7482-7505
作者:  Alvarado, Matthew J.;  Winijkul, Ekbordin;  Adams-Selin, Rebecca;  Hunt, Eric;  Brodowski, Christopher;  Lonsdale, Chantelle R.;  Shindell, Drew T.;  Faluvegi, Gregory;  Kleiman, Gary;  Mosier, Thomas M.;  Kumar, Rajesh
收藏  |  浏览/下载:6/0  |  提交时间:2019/04/09
How Will Air Quality Change in South Asia by 2050? 期刊论文
JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES, 2018, 123 (3) : 1840-1864
作者:  Kumar, Rajesh;  Barth, Mary C.;  Pfister, G. G.;  Delle Monache, L.;  Lamarque, J. F.;  Archer-Nicholls, S.;  Tilmes, S.;  Ghude, S. D.;  Wiedinmyer, C.;  Naja, M.;  Walters, S.
收藏  |  浏览/下载:9/0  |  提交时间:2019/04/09
air quality  ozone  PM2  5  RCP  South Asia