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Tobacco smoking and somatic mutations in human bronchial epithelium 期刊论文
NATURE, 2020, 578 (7794) : 266-+
作者:  Sharma, Nikhil;  Flaherty, Kali;  Lezgiyeva, Karina;  Wagner, Daniel E.;  Klein, Allon M.;  Ginty, David D.
收藏  |  浏览/下载:40/0  |  提交时间:2020/07/03

Whole-genome sequencing of normal bronchial epithelium from 16 individuals shows that tobacco smoking increases genomic heterogeneity, mutational burden and driver mutations, whereas stopping smoking promotes replenishment of the epithelium with near-normal cells.


Tobacco smoking causes lung cancer(1-3), a process that is driven by more than 60 carcinogens in cigarette smoke that directly damage and mutate DNA(4,5). The profound effects of tobacco on the genome of lung cancer cells are well-documented(6-10), but equivalent data for normal bronchial cells are lacking. Here we sequenced whole genomes of 632 colonies derived from single bronchial epithelial cells across 16 subjects. Tobacco smoking was the major influence on mutational burden, typically adding from 1,000 to 10,000 mutations per cell  massively increasing the variance both within and between subjects  and generating several distinct mutational signatures of substitutions and of insertions and deletions. A population of cells in individuals with a history of smoking had mutational burdens that were equivalent to those expected for people who had never smoked: these cells had less damage from tobacco-specific mutational processes, were fourfold more frequent in ex-smokers than current smokers and had considerably longer telomeres than their more-mutated counterparts. Driver mutations increased in frequency with age, affecting 4-14% of cells in middle-aged subjects who had never smoked. In current smokers, at least 25% of cells carried driver mutations and 0-6% of cells had two or even three drivers. Thus, tobacco smoking increases mutational burden, cell-to-cell heterogeneity and driver mutations, but quitting promotes replenishment of the bronchial epithelium from mitotically quiescent cells that have avoided tobacco mutagenesis.


  
Growth response to cuttings in Norway spruce stands under even-aged and uneven-aged management 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2019, 437: 314-323
作者:  Hynynen, Jari;  Eerikainen, Kalle;  Makinen, Harri;  Valkonen, Sauli
收藏  |  浏览/下载:16/0  |  提交时间:2019/04/09
Picea abies (L.) Karst.  Growth and yield  Even-aged stand  Uneven-aged stand  Stand basal area growth  Growth model  Thinning response  
Development of 26-year-old mixed forests following different regeneration cutting treatments in Andean temperate rainforests of south-central Chile 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2019, 432: 686-693
作者:  Donoso, Pablo J.;  Schlegel, Bastienne C.;  Salas-Eljatib, Christian;  Donoso, Claudio
收藏  |  浏览/下载:16/0  |  提交时间:2019/04/09
Forest secondary succession  Even-aged regeneration cuttings  Evergreen temperate forests  Clearcutting  Strip clearcutting  Reserve shelterwood cutting  
Peromyscus responses to alternative forest management systems in the Missouri Ozarks, USA 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2018, 429: 558-569
作者:  Gitzen, Robert A.;  Renken, Rochelle B.;  Fantz, Debby K.;  Wolf, Alexander J.;  Jensen, Randy G.;  Favara, Jean;  Millspaugh, Joshua J.
收藏  |  浏览/下载:15/0  |  提交时间:2019/04/09
Deermice  Even-aged management  Missouri Ozarks  MOFEP  Small mammals  Uneven-aged management  
Overstory species response to clearcut harvest across environmental gradients in hardwood forests 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2018, 428: 66-80
作者:  Swaim, J. Travis;  Dey, Daniel C.;  Saunders, Michael R.;  Weigel, Dale R.;  Thornton, Christopher D.;  Kabrick, John M.;  Jenkins, Michael A.
收藏  |  浏览/下载:13/0  |  提交时间:2019/04/09
Long-term data  Stand development  Even-aged  Species composition  Central Hardwood Region  Ordination analysis  Edaphic variables  Disturbance history  
Positive interactions between Pinus massoniana and Castanopsis hystrix species in the uneven-aged mixed plantations can produce more ecosystem carbon in subtropical China 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2018, 410: 193-200
作者:  You, Yeming;  Huang, Xueman;  Zhu, Hongguang;  Liu, Shirong;  Liang, Hongwen;  Wen, Yuanguang;  Wang, Hui;  Cai, Daoxiong;  Ye, Duo
收藏  |  浏览/下载:23/0  |  提交时间:2019/04/09
Carbon sequestration  Even-aged mixed plantation  Interspecies competition  South subtropical  Uneven-aged mixed plantation  
Influence of reproduction cutting methods on structure, growth and regeneration of longleaf pine forests in flatwoods and uplands 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2017, 389
作者:  Brockway, Dale G.;  Outcalt, Kenneth W.
收藏  |  浏览/下载:10/0  |  提交时间:2019/04/09
Pinus palustris Mill.  Continuous cover forestry  Pro-B method  Selection systems  Uneven-aged silviculture  Shelterwood methods  Even-aged silviculture  
Short-term responses of Timber Rattlesnakes (Crotalus horridus) to even-aged timber harvests in Indiana 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2017, 387
作者:  MacGowan, Brian J.;  Currylow, Andrea F. T.;  MacNeil, Jami E.
收藏  |  浏览/下载:8/0  |  提交时间:2019/04/09
Crotalus horridus  Even-aged management  Forests  Hardwood Ecosystem Experiment  Home-range  
Long-term impacts of three forest management strategies on herpetofauna abundance in the Missouri Ozarks 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2017, 387
作者:  Rota, Christopher T.;  Wolf, Alexander J.;  Renken, Rochelle B.;  Gitzen, Robert A.;  Fantz, Debby K.;  Montgomery, Robert A.;  Olson, Matthew G.;  Vangilder, Larry D.;  Millspaugh, Joshua J.
收藏  |  浏览/下载:37/0  |  提交时间:2019/04/09
Amphibians  Reptiles  Even-aged management  Uneven-aged management  Hierarchical models  MOFEP  
A two-component dynamic stand model of natural thinning 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2017, 385
作者:  Stankova, Tatiana V.;  Dieguez-Aranda, Ulises
收藏  |  浏览/下载:3/0  |  提交时间:2019/04/09
Stand growth projection  Natural thinning  Stand specific parameter  Dynamic equation  Even-aged stands