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Parasitoids as drivers of symbiont diversity in an insect host 期刊论文
ECOLOGY LETTERS, 2020, 23 (8) : 1232-1241
作者:  Hafer-Hahmann, Nina;  Vorburger, Christoph
收藏  |  浏览/下载:12/0  |  提交时间:2020/05/13
adaptation  aphids  Aphis fabae  defensive symbiois  experimental evolution  immune system  Lysiphlebus fabarum  maintenance of diversity  parasitoid wasps  specificity  
Origin of complexity in haemoglobin evolution 期刊论文
NATURE, 2020
作者:  Cheema, Suraj S.;  Kwon, Daewoong;  Shanker, Nirmaan;  dos Reis, Roberto;  Hsu, Shang-Lin;  Xiao, Jun;  Zhang, Haigang;  Wagner, Ryan;  Datar, Adhiraj;  McCarter, Margaret R.;  Serrao, Claudy R.;  Yadav, Ajay K.;  Karbasian, Golnaz;  Hsu, Cheng-Hsiang;  Tan, Ava J.;  Wang, Li-Chen;  Thakare, Vishal;  Zhang, Xiang;  Mehta, Apurva;  Karapetrova, Evguenia;  Chopdekar, Rajesh, V;  Shafer, Padraic;  Arenholz, Elke;  Hu, Chenming;  Proksch, Roger;  Ramesh, Ramamoorthy;  Ciston, Jim;  Salahuddin, Sayeef
收藏  |  浏览/下载:80/0  |  提交时间:2020/07/03

Most proteins associate into multimeric complexes with specific architectures(1,2), which often have functional properties such as cooperative ligand binding or allosteric regulation(3). No detailed knowledge is available about how any multimer and its functions arose during evolution. Here we use ancestral protein reconstruction and biophysical assays to elucidate the origins of vertebrate haemoglobin, a heterotetramer of paralogous alpha- and beta-subunits that mediates respiratory oxygen transport and exchange by cooperatively binding oxygen with moderate affinity. We show that modern haemoglobin evolved from an ancient monomer and characterize the historical '  missing link'  through which the modern tetramer evolved-a noncooperative homodimer with high oxygen affinity that existed before the gene duplication that generated distinct alpha- and beta-subunits. Reintroducing just two post-duplication historical substitutions into the ancestral protein is sufficient to cause strong tetramerization by creating favourable contacts with more ancient residues on the opposing subunit. These surface substitutions markedly reduce oxygen affinity and even confer cooperativity, because an ancient linkage between the oxygen binding site and the multimerization interface was already an intrinsic feature of the protein'  s structure. Our findings establish that evolution can produce new complex molecular structures and functions via simple genetic mechanisms that recruit existing biophysical features into higher-level architectures.


Experimental analysis of reconstructed ancestral globins reveals that haemoglobin'  s complex tetrameric structure and oxygen-binding functions evolved by simple genetic and biophysical mechanisms.


  
Quality-quantity trade-offs drive functional trait evolution in a model microalgal 'climate change winner' 期刊论文
ECOLOGY LETTERS, 2020, 23 (5) : 780-790
作者:  Lindberg, Rasmus T.;  Collins, Sinead
收藏  |  浏览/下载:19/0  |  提交时间:2020/07/02
Carbon dioxide  carbon dioxide  Chlamydomonas  experimental evolution  photosynthesis  phytoplankton bloom  primary production  Prodigal Son  reactive oxygen  
Spatial connectedness imposes local- and metapopulation-level selection on life history through feedbacks on demography 期刊论文
ECOLOGY LETTERS, 2020, 23 (2) : 242-253
作者:  Masier, Stefano;  Bonte, Dries
收藏  |  浏览/下载:17/0  |  提交时间:2020/07/02
Arthropoda  connectedness  connectivity  experimental evolution  habitat fragmentation  
Spatial connectedness imposes local- and metapopulation-level selection on life history through feedbacks on demography 期刊论文
ECOLOGY LETTERS, 2020, 23 (2) : 242-253
作者:  Masier, Stefano;  Bonte, Dries
收藏  |  浏览/下载:14/0  |  提交时间:2020/02/17
Arthropoda  connectedness  connectivity  experimental evolution  habitat fragmentation  
Size-abundance rules? Evolution changes scaling relationships between size, metabolism and demography 期刊论文
ECOLOGY LETTERS, 2019, 22 (9) : 1407-1416
作者:  Malerba, Martino E.;  Marshall, Dustin J.
收藏  |  浏览/下载:17/0  |  提交时间:2019/11/27
Allometry  artificial selection  Centre for Geometric Biology  demographic parameters  evolutionary size-shift  experimental evolution  metabolic ecology  metabolic energy  scaling  
Nonlinear frequency-dependent selection promotes long-term coexistence between bacteria species 期刊论文
ECOLOGY LETTERS, 2019, 22 (8) : 1192-1202
作者:  Harmand, Noemie;  Federico, Valentine;  Hindre, Thomas;  Lenormand, Thomas
收藏  |  浏览/下载:14/0  |  提交时间:2019/11/27
Citrobacter freundii  Escherichia coli  experimental co-evolution  Nalidixic acid  negative frequency-dependent selection  NFDS  polymorphism  
Rapid thermal adaptation in a marine diatom reveals constraints and trade-offs 期刊论文
GLOBAL CHANGE BIOLOGY, 2018, 24 (10) : 4554-4565
作者:  O&;  39;Donnell, Daniel R.
收藏  |  浏览/下载:15/0  |  提交时间:2019/04/09
experimental evolution  function-valued trait  nitrate growth affinity  temperature optimum  Thalassiosira pseudonana  thermal reaction norm  trade-off  
Kin competition accelerates experimental range expansion in an arthropod herbivore 期刊论文
ECOLOGY LETTERS, 2018, 21 (2) : 225-234
作者:  Van Petegem, Katrien;  Moerman, Felix;  Dahirel, Maxime;  Fronhofer, Emanuel A.;  Vandegehuchte, Martijn L.;  Van Leeuwen, Thomas;  Wybouw, Nicky;  Stoks, Robby;  Bonte, Dries
收藏  |  浏览/下载:15/0  |  提交时间:2019/04/09
Experimental evolution  invasions  relatedness  spatial sorting  Tetranychus urticae  
Eco-energetic consequences of evolutionary shifts in body size 期刊论文
ECOLOGY LETTERS, 2018, 21 (1) : 54-62
作者:  Malerba, Martino E.;  White, Craig R.;  Marshall, Dustin J.
收藏  |  浏览/下载:11/0  |  提交时间:2019/04/09
Allometry  artificial selection  evolutionary size shift  experimental evolution  geometric biology  metabolism  net energy flux  primary production  scaling