GSTDTAP

浏览/检索结果: 共3条,第1-3条 帮助

已选(0)清除 条数/页:   排序方式:
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes 期刊论文
NATURE, 2020, 578 (7793) : 102-+
作者:  Clark, Timothy D.;  Raby, Graham D.;  Roche, Dominique G.;  Binning, Sandra A.;  Speers-Roesch, Ben;  Jutfelt, Fredrik;  Sundin, Josefin
收藏  |  浏览/下载:30/0  |  提交时间:2020/07/03

The discovery of drivers of cancer has traditionally focused on protein-coding genes(1-4). Here we present analyses of driver point mutations and structural variants in non-coding regions across 2,658 genomes from the Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium(5) of the International Cancer Genome Consortium (ICGC) and The Cancer Genome Atlas (TCGA). For point mutations, we developed a statistically rigorous strategy for combining significance levels from multiple methods of driver discovery that overcomes the limitations of individual methods. For structural variants, we present two methods of driver discovery, and identify regions that are significantly affected by recurrent breakpoints and recurrent somatic juxtapositions. Our analyses confirm previously reported drivers(6,7), raise doubts about others and identify novel candidates, including point mutations in the 5'  region of TP53, in the 3'  untranslated regions of NFKBIZ and TOB1, focal deletions in BRD4 and rearrangements in the loci of AKR1C genes. We show that although point mutations and structural variants that drive cancer are less frequent in non-coding genes and regulatory sequences than in protein-coding genes, additional examples of these drivers will be found as more cancer genomes become available.


  
Trends and controls of terrestrial gross primary productivity of China during 2000-2016 期刊论文
ENVIRONMENTAL RESEARCH LETTERS, 2019, 14 (8)
作者:  Ma, Jun;  Xiao, Xiangming;  Miao, Renhui;  Li, Yao;  Chen, Bangqian;  Zhang, Yao;  Zhao, Bin
收藏  |  浏览/下载:34/0  |  提交时间:2019/11/27
vegetation productivity  breakpoints  trends shift  ecological restoration projects  climate change and land cover change  
Observed precipitation trend changes in the western Mediterranean region 期刊论文
INTERNATIONAL JOURNAL OF CLIMATOLOGY, 2017, 37
作者:  Valdes-Abellan, J.;  Pardo, M. A.;  Tenza-Abril, A. J.
收藏  |  浏览/下载:14/0  |  提交时间:2019/04/09
drought  semiarid regions  breakpoints  rainfall reduction  daily precipitation patterns