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Ball-and-chain inactivation in a calcium-gated potassium channel 期刊论文
NATURE, 2020, 580 (7802) : 288-+
作者:  Peron, Simon;  Pancholi, Ravi;  Voelcker, Bettina;  Wittenbach, Jason D.;  olafsdottir, H. Freyja;  Freeman, Jeremy;  Svoboda, Karel
收藏  |  浏览/下载:35/0  |  提交时间:2020/07/03

Cryo-electron microscopy structures and molecular dynamics simulations of the calcium-activated potassium channel MthK from Methanobacterium thermoautotrophicum are used to show that gating of this channel involves a ball-and-chain inactivation mechanism mediated by a previously unresolved N-terminal peptide.


Inactivation is the process by which ion channels terminate ion flux through their pores while the opening stimulus is still present(1). In neurons, inactivation of both sodium and potassium channels is crucial for the generation of action potentials and regulation of firing frequency(1,2). A cytoplasmic domain of either the channel or an accessory subunit is thought to plug the open pore to inactivate the channel via a '  ball-and-chain'  mechanism(3-7). Here we use cryo-electron microscopy to identify the molecular gating mechanism in calcium-activated potassium channels by obtaining structures of the MthK channel from Methanobacterium thermoautotrophicum-a purely calcium-gated and inactivating channel-in a lipid environment. In the absence of Ca2+, we obtained a single structure in a closed state, which was shown by atomistic simulations to be highly flexible in lipid bilayers at ambient temperature, with large rocking motions of the gating ring and bending of pore-lining helices. In Ca2+-bound conditions, we obtained several structures, including multiple open-inactivated conformations, further indication of a highly dynamic protein. These different channel conformations are distinguished by rocking of the gating rings with respect to the transmembrane region, indicating symmetry breakage across the channel. Furthermore, in all conformations displaying open channel pores, the N terminus of one subunit of the channel tetramer sticks into the pore and plugs it, with free energy simulations showing that this is a strong interaction. Deletion of this N terminus leads to functionally non-inactivating channels and structures of open states without a pore plug, indicating that this previously unresolved N-terminal peptide is responsible for a ball-and-chain inactivation mechanism.


  
Characterization of Submesoscale Turbulence in the East/Japan Sea Using Geostationary Ocean Color Satellite Images 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2019, 46 (14) : 8214-8223
作者:  Choi, J.;  Park, Y-G;  Kim, W.;  Kim, Y. H.
收藏  |  浏览/下载:23/0  |  提交时间:2019/11/27
submesoscale observation  geostationary satellite  chlorophyll a  kinetic energy spectra  velocity structure function  energy flux  
Surface Energy Budgets of Arctic Tundra During Growing Season 期刊论文
JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES, 2019, 124 (13) : 6999-7017
作者:  El Sharif, Husayn;  Zhou, Wenbo;  Ivanov, Valeriy;  Sheshukov, Aleksey;  Mazepa, Valeriy;  Wang, Jingfeng
收藏  |  浏览/下载:19/0  |  提交时间:2019/11/27
energy budget  heat flux  Arctic  permafrost  MEP  
Carbon flux from decomposing wood and its dependency on temperature, wood N-2 fixation rate, moisture and fungal composition in a Norway spruce forest 期刊论文
GLOBAL CHANGE BIOLOGY, 2019, 25 (5) : 1852-1867
作者:  Rinne-Garmston, Katja T.;  Peltoniemi, Krista;  Chen, Janet;  Peltoniemi, Mikko;  Fritze, Hannu;  Makipaa, Raisa
收藏  |  浏览/下载:30/0  |  提交时间:2019/11/26
activation energy  boreal forest  carbon flux  coarse woody debris  N-2 fixation  nifH  respiration rate  wood-inhabiting fungi  
Mechanistic links between underestimated CO2 fluxes and non-closure of the surface energy balance in a semi-arid sagebrush ecosystem 期刊论文
ENVIRONMENTAL RESEARCH LETTERS, 2019, 14 (4)
作者:  Gao, Zhongming;  Liu, Heping;  Missik, Justine E. C.;  Yao, Jingyu;  Huang, Maoyi;  Chen, Xingyuan;  Arntzen, Evan;  Mcfarland, Douglas P.
收藏  |  浏览/下载:20/0  |  提交时间:2019/11/26
CO2 flux  eddy covariance method  ensemble empirical mode decomposition  sensible and latent heat fluxes  surface energy balance closure  
Comparing Electron Energetics and UV Brightness in Jupiter's Northern Polar Region During Juno Perijove 5 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2019, 46 (1) : 19-27
作者:  Ebert, R. W.;  Greathouse, T. K.;  Clark, G.;  Allegrini, F.;  Bagenal, F.;  Bolton, S. J.;  Connerney, J. E. P.;  Gladstone, G. R.;  Imai, M.;  Hue, V.;  Kurth, W. S.;  Levin, S.;  Louarn, P.;  Mauk, B. H.;  McComas, D. J.;  Paranicas, C.;  Szalay, J. R.;  Thomsen, M. F.;  Valek, P. W.;  Wilson, R. J.
收藏  |  浏览/下载:34/0  |  提交时间:2019/04/09
Juno  Jupiter'  s aurora  polar auroral region  polar UV emissions  precipitating electrons  electron energy flux  
Evolution mechanism of synoptic-scale EAP teleconnection pattern and its relationship to summer precipitation in China 期刊论文
ATMOSPHERIC RESEARCH, 2018, 214: 150-162
作者:  Wang, Lijuan;  Wang, Chao;  Guo, Dong
收藏  |  浏览/下载:24/0  |  提交时间:2019/04/09
East Asia-Pacific pattern  Wave-activity flux  Extreme precipitation  Circulation pattern  Energy conversion  
Lake-Atmosphere Heat Flux Dynamics of a Thermokarst Lake in Arctic Siberia 期刊论文
JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES, 2018, 123 (10) : 5222-5239
作者:  Franz, D.;  Mammarella, I.;  Boike, J.;  Kirillin, G.;  Vesala, T.;  Bornemann, N.;  Larmanou, E.;  Langer, M.;  Sachs, T.
收藏  |  浏览/下载:19/0  |  提交时间:2019/04/09
Arctic Lake  heat flux  evaporation  eddy covariance  energy balance  bulk transfer model  
Controls on the T Phase Energy Fluxes Recorded on Juan Fernandez Island by Continental Seismic Wave Paths and Nazca Bathymetry 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2018, 45 (6) : 2610-2617
作者:  Saez, Miguel;  Ruiz, Sergio
收藏  |  浏览/下载:10/0  |  提交时间:2019/04/09
T phase  T phase energy flux  Juan Fernandez Island  wave propagation  
Eco-energetic consequences of evolutionary shifts in body size 期刊论文
ECOLOGY LETTERS, 2018, 21 (1) : 54-62
作者:  Malerba, Martino E.;  White, Craig R.;  Marshall, Dustin J.
收藏  |  浏览/下载:11/0  |  提交时间:2019/04/09
Allometry  artificial selection  evolutionary size shift  experimental evolution  geometric biology  metabolism  net energy flux  primary production  scaling