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FACT caught in the act of manipulating the nucleosome 期刊论文
NATURE, 2020, 577 (7790) : 426-+
作者:  Shen, Helen
收藏  |  浏览/下载:13/0  |  提交时间:2020/07/03

The organization of genomic DNA into nucleosomes profoundly affects all DNA-related processes in eukaryotes. The histone chaperone known as '  facilitates chromatin transcription'  (FACT(1)) (consisting of subunits SPT16 and SSRP1) promotes both disassembly and reassembly of nucleosomes during gene transcription, DNA replication and DNA repair(2). However, the mechanism by which FACT causes these opposing outcomes is unknown. Here we report two cryo-electron-microscopic structures of human FACT in complex with partially assembled subnucleosomes, with supporting biochemical and hydrogen-deuterium exchange data. We find that FACT is engaged in extensive interactions with nucleosomal DNA and all histone variants. The large DNA-binding surface on FACT appears to be protected by the carboxy-terminal domains of both of its subunits, and this inhibition is released by interaction with H2A-H2B, allowing FACT-H2A-H2B to dock onto a complex containing DNA and histones H3 and H4 (ref. (3)). SPT16 binds nucleosomal DNA and tethers H2A-H2B through its carboxy-terminal domain by acting as a placeholder for DNA. SSRP1 also contributes to DNA binding, and can assume two conformations, depending on whether a second H2A-H2B dimer is present. Our data suggest a compelling mechanism for how FACT maintains chromatin integrity during polymerase passage, by facilitating removal of the H2A-H2B dimer, stabilizing intermediate subnucleosomal states and promoting nucleosome reassembly. Our findings reconcile discrepancies regarding the many roles of FACT and underscore the dynamic interactions between histone chaperones and nucleosomes.


  
LEM2 phase separation promotes ESCRT-mediated nuclear envelope reformation 期刊论文
NATURE, 2020
作者:  Deshaies, Raymond J.
收藏  |  浏览/下载:27/0  |  提交时间:2020/07/03

Following cell division, phase separation of the transmembrane adaptor LEM2 ensures that the ESCRT machinery remodels microtubules and seals the nuclear envelope.


During cell division, remodelling of the nuclear envelope enables chromosome segregation by the mitotic spindle(1). The reformation of sealed nuclei requires ESCRTs (endosomal sorting complexes required for transport) and LEM2, a transmembrane ESCRT adaptor(2-4). Here we show how the ability of LEM2 to condense on microtubules governs the activation of ESCRTs and coordinated spindle disassembly. The LEM motif of LEM2 binds BAF, conferring on LEM2 an affinity for chromatin(5,6), while an adjacent low-complexity domain (LCD) promotes LEM2 phase separation. A proline-arginine-rich sequence within the LCD binds to microtubules and targets condensation of LEM2 to spindle microtubules that traverse the nascent nuclear envelope. Furthermore, the winged-helix domain of LEM2 activates the ESCRT-II/ESCRT-III hybrid protein CHMP7 to form co-oligomeric rings. Disruption of these events in human cells prevented the recruitment of downstream ESCRTs, compromised spindle disassembly, and led to defects in nuclear integrity and DNA damage. We propose that during nuclear reassembly LEM2 condenses into a liquid-like phase and coassembles with CHMP7 to form a macromolecular O-ring seal at the confluence between membranes, chromatin and the spindle. The properties of LEM2 described here, and the homologous architectures of related inner nuclear membrane proteins(7,8), suggest that phase separation may contribute to other critical envelope functions, including interphase repair(8-13) and chromatin organization(14-17).


  
Predicting coral community recovery using multi-species population dynamics models 期刊论文
ECOLOGY LETTERS, 2019, 22 (4) : 605-615
作者:  Kayal, Mohsen;  Lenihan, Hunter S.;  Brooks, Andrew J.;  Holbrook, Sally J.;  Schmitt, Russell J.;  Kendall, Bruce E.
收藏  |  浏览/下载:27/0  |  提交时间:2019/04/09
Community recovery  coral reefs  density dependence  ecosystem function  elasticity analysis  integral projection model  life-history traits  multi-species demographic model  reassembly  size structure  
Predicting coral community recovery using multi-species population dynamics models 期刊论文
ECOLOGY LETTERS, 2018, 21 (12) : 1790-1799
作者:  Kayal, Mohsen;  Lenihan, Hunter S.;  Brooks, Andrew J.;  Holbrook, Sally J.;  Schmitt, Russell J.;  Kendall, Bruce E.
收藏  |  浏览/下载:19/0  |  提交时间:2019/04/09
Community recovery  coral reefs  density dependence  ecosystem function  elasticity analysis  integral projection model  life-history traits  multi-species demographic model  reassembly  size structure  
Community disassembly under global change: Evidence in favor of the stress-dominance hypothesis 期刊论文
GLOBAL CHANGE BIOLOGY, 2018, 24 (9) : 4417-4427
作者:  Kuczynski, Lucie;  Grenouillet, Gael
收藏  |  浏览/下载:15/0  |  提交时间:2019/04/09
assembly rules  biological invasion  climate change  community reassembly  functional diversity  long-term change  phylogenetic diversity  stream fish community  
A casualty of climate change? Loss of freshwater forest islands on Florida's Gulf Coast 期刊论文
GLOBAL CHANGE BIOLOGY, 2017, 23 (12)
作者:  Langston, Amy K.;  Kaplan, David A.;  Putz, Francis E.
收藏  |  浏览/下载:16/0  |  提交时间:2019/04/09
cabbage palm  coastal forest  community reassembly  Sabal palmetto  sea level rise  tidal flooding  vegetation shift