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Isolation of an archaeon at the prokaryote-eukaryote interface 期刊论文
NATURE, 2020, 577 (7791) : 519-+
作者:  Imachi, Hiroyuki;  Nobu, Masaru K.;  Nakahara, Nozomi;  Morono, Yuki;  Ogawara, Miyuki;  Takaki, Yoshihiro;  Takano, Yoshinori;  Uematsu, Katsuyuki;  Ikuta, Tetsuro;  Ito, Motoo;  Matsui, Yohei;  Miyazaki, Masayuki;  Murata, Kazuyoshi;  Saito, Yumi;  Sakai, Sanae;  Song, Chihong;  Tasumi, Eiji;  Yamanaka, Yuko;  Yamaguchi, Takashi;  Kamagata, Yoichi;  Tamaki, Hideyuki;  Takai, Ken
收藏  |  浏览/下载:20/0  |  提交时间:2020/07/03

The origin of eukaryotes remains unclear(1-4). Current data suggest that eukaryotes may have emerged from an archaeal lineage known as '  Asgard'  archaea(5,6). Despite the eukaryote-like genomic features that are found in these archaea, the evolutionary transition from archaea to eukaryotes remains unclear, owing to the lack of cultured representatives and corresponding physiological insights. Here we report the decade-long isolation of an Asgard archaeon related to Lokiarchaeota from deep marine sediment. The archaeon-'  Candidatus Prometheoarchaeum syntrophicum'  strain MK-D1-is an anaerobic, extremely slow-growing, small coccus (around 550 nm in diameter) that degrades amino acids through syntrophy. Although eukaryote-like intracellular complexes have been proposed for Asgard archaea(6), the isolate has no visible organelle-like structure. Instead, Ca. P. syntrophicum is morphologically complex and has unique protrusions that are long and often branching. On the basis of the available data obtained from cultivation and genomics, and reasoned interpretations of the existing literature, we propose a hypothetical model for eukaryogenesis, termed the entangle-engulf-endogenize (also known as E-3) model.


Isolation and characterization of an archaeon that is most closely related to eukaryotes reveals insights into how eukaryotes may have evolved from prokaryotes.


  
The fitness of chemotrophs increases when their catabolic by-products are consumed by other species 期刊论文
ECOLOGY LETTERS, 2019
作者:  Seto, Mayumi;  Yoh, Iwasa
收藏  |  浏览/下载:16/0  |  提交时间:2019/11/27
Abundant Resource Premium  chemotrophs  material network  mathematical model  microbial ecology  mutualism  niche construction  niche expansion  syntrophy  
Pyrite formation from FeS and H2S is mediated through microbial redox activity 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2019, 116 (14) : 6897-6902
作者:  Thiel, Joana;  Byrne, James M.;  Kappler, Andreas;  Schink, Bernhard;  Pester, Michael
收藏  |  浏览/下载:19/0  |  提交时间:2019/11/27
sulfur cycle  biogenic mineral transformation  syntrophy  deep biosphere  origin of life  
Syntrophic interactions and mechanisms underpinning anaerobic methane oxidation: targeted metaproteogenomics, single-cell protein detection and quantitative isotope imaging of microbial consortia 科技报告
来源:US Department of Energy (DOE). 出版年: 2014
作者:  Orphan, Victoria Jeanne
收藏  |  浏览/下载:13/0  |  提交时间:2019/04/05
methane  syntrophy  stable isotope probing  nanoSIMS  proteomics