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The hemispheric contrast in cloud microphysical properties constrains aerosol forcing 期刊论文
Proceedings of the National Academy of Science, 2020
作者:  Isabel L. McCoy;  Daniel T. McCoy;  Robert Wood;  Leighton Regayre;  Duncan Watson-Parris;  Daniel P. Grosvenor;  Jane P. Mulcahy;  Yongxiang Hu;  Frida A.-M. Bender;  Paul R. Field;  Kenneth S. Carslaw;  Hamish Gordon
收藏  |  浏览/下载:11/0  |  提交时间:2020/08/09
A discussion on influences of turbulent diffusivity and surface drag parameterizations using a linear model of the tropical cyclone boundary layer wind field 期刊论文
ATMOSPHERIC RESEARCH, 2020, 237
作者:  Li, W.;  Hu, Z.;  Pei, Z.;  Li, S.;  Chan, P. W.
收藏  |  浏览/下载:4/0  |  提交时间:2020/07/02
Theoretical model  Surface drag coefficient  Turbulent diffusivity  Typhoon  
Origin of complexity in haemoglobin evolution 期刊论文
NATURE, 2020
作者:  Cheema, Suraj S.;  Kwon, Daewoong;  Shanker, Nirmaan;  dos Reis, Roberto;  Hsu, Shang-Lin;  Xiao, Jun;  Zhang, Haigang;  Wagner, Ryan;  Datar, Adhiraj;  McCarter, Margaret R.;  Serrao, Claudy R.;  Yadav, Ajay K.;  Karbasian, Golnaz;  Hsu, Cheng-Hsiang;  Tan, Ava J.;  Wang, Li-Chen;  Thakare, Vishal;  Zhang, Xiang;  Mehta, Apurva;  Karapetrova, Evguenia;  Chopdekar, Rajesh, V;  Shafer, Padraic;  Arenholz, Elke;  Hu, Chenming;  Proksch, Roger;  Ramesh, Ramamoorthy;  Ciston, Jim;  Salahuddin, Sayeef
收藏  |  浏览/下载:50/0  |  提交时间:2020/07/03

Most proteins associate into multimeric complexes with specific architectures(1,2), which often have functional properties such as cooperative ligand binding or allosteric regulation(3). No detailed knowledge is available about how any multimer and its functions arose during evolution. Here we use ancestral protein reconstruction and biophysical assays to elucidate the origins of vertebrate haemoglobin, a heterotetramer of paralogous alpha- and beta-subunits that mediates respiratory oxygen transport and exchange by cooperatively binding oxygen with moderate affinity. We show that modern haemoglobin evolved from an ancient monomer and characterize the historical '  missing link'  through which the modern tetramer evolved-a noncooperative homodimer with high oxygen affinity that existed before the gene duplication that generated distinct alpha- and beta-subunits. Reintroducing just two post-duplication historical substitutions into the ancestral protein is sufficient to cause strong tetramerization by creating favourable contacts with more ancient residues on the opposing subunit. These surface substitutions markedly reduce oxygen affinity and even confer cooperativity, because an ancient linkage between the oxygen binding site and the multimerization interface was already an intrinsic feature of the protein'  s structure. Our findings establish that evolution can produce new complex molecular structures and functions via simple genetic mechanisms that recruit existing biophysical features into higher-level architectures.


Experimental analysis of reconstructed ancestral globins reveals that haemoglobin'  s complex tetrameric structure and oxygen-binding functions evolved by simple genetic and biophysical mechanisms.


  
Loopy Levy flights enhance tracer diffusion in active suspensions 期刊论文
NATURE, 2020, 579 (7799) : 364-+
作者:  Hu, Bo;  Jin, Chengcheng;  Zeng, Xing;  Resch, Jon M.;  Jedrychowski, Mark P.;  Yang, Zongfang;  Desai, Bhavna N.;  Banks, Alexander S.;  Lowell, Bradford B.;  Mathis, Diane;  Spiegelman, Bruce M.
收藏  |  浏览/下载:16/0  |  提交时间:2020/07/03

A theoretical framework describing the hydrodynamic interactions between a passive particle and an active medium in out-of-equilibrium systems predicts long-range Levy flights for the diffusing particle driven by the density of the active component.


Brownian motion is widely used as a model of diffusion in equilibrium media throughout the physical, chemical and biological sciences. However, many real-world systems are intrinsically out of equilibrium owing to energy-dissipating active processes underlying their mechanical and dynamical features(1). The diffusion process followed by a passive tracer in prototypical active media, such as suspensions of active colloids or swimming microorganisms(2), differs considerably from Brownian motion, as revealed by a greatly enhanced diffusion coefficient(3-10) and non-Gaussian statistics of the tracer displacements(6,9,10). Although these characteristic features have been extensively observed experimentally, there is so far no comprehensive theory explaining how they emerge from the microscopic dynamics of the system. Here we develop a theoretical framework to model the hydrodynamic interactions between the tracer and the active swimmers, which shows that the tracer follows a non-Markovian coloured Poisson process that accounts for all empirical observations. The theory predicts a long-lived Levy flight regime(11) of the loopy tracer motion with a non-monotonic crossover between two different power-law exponents. The duration of this regime can be tuned by the swimmer density, suggesting that the optimal foraging strategy of swimming microorganisms might depend crucially on their density in order to exploit the Levy flights of nutrients(12). Our framework can be applied to address important theoretical questions, such as the thermodynamics of active systems(13), and practical ones, such as the interaction of swimming microorganisms with nutrients and other small particles(14) (for example, degraded plastic) and the design of artificial nanoscale machines(15).


  
Alfv茅nic velocity spikes and rotational flows in the near-Sun solar wind 期刊论文
Nature, 2019, 576: 228-231
作者:  J. C. Kasper;  S. D. Bale;  J. W. Belcher;  M. Berthomier;  A. W. Case;  B. D. G. Chandran;  D. W. Curtis;  D. Gallagher;  S. P. Gary;  L. Golub;  J. S. Halekas;  G. C. Ho;  T. S. Horbury;  Q. Hu;  J. Huang;  K. G. Klein;  K. E. Korreck;  D. E. Larson;  R. Livi;  B. Maruca;  B. Lavraud;  P. Louarn;  M. Maksimovic;  M. Martinovic;  D. McGinnis;  N. V. Pogorelov;  J. D. Richardson;  R. M. Skoug;  J. T. Steinberg;  M. L. Stevens;  A. Szabo;  M. Velli;  P. L. Whittlesey;  K. H. Wright;  G. P. Zank;  R. J. MacDowall;  D. J. McComas;  R. L. McNutt Jr;  M. Pulupa;  N. E. Raouafi;  N. A. Schwadron
收藏  |  浏览/下载:14/0  |  提交时间:2020/04/16
Global satellite-observed daily vertical migrations of ocean animals 期刊论文
Nature, 2019, 576: 257-261
作者:  Michael J. Behrenfeld;  Peter Gaube;  Alice Della Penna;  Robert T. O鈥橫alley;  William J. Burt;  Yongxiang Hu;  Paula S. Bontempi;  Deborah K. Steinberg;  Emmanuel S. Boss;  David A. Siegel;  Chris A. Hostetler;  Philippe D. Tortell;  Scott C. Doney
收藏  |  浏览/下载:8/0  |  提交时间:2020/04/16
Genetic basis of ruminant headgear and rapid antler regeneration 期刊论文
SCIENCE, 2019, 364 (6446) : 1153-+
作者:  Wang, Yu;  Zhang, Chenzhou;  Wang, Nini;  Li, Zhipeng;  Heller, Rasmus;  Liu, Rong;  Zhao, Yue;  Han, Jiangang;  Pan, Xiangyu;  Zheng, Zhuqing;  Dai, Xueqin;  Chen, Ceshi;  Dou, Mingle;  Peng, Shujun;  Chen, Xianqing;  Liu, Jing;  Li, Ming;  Wang, Kun;  Liu, Chang;  Lin, Zeshan;  Chen, Lei;  Hao, Fei;  Zhu, Wenbo;  Song, Chengchuang;  Zhao, Chen;  Zheng, Chengli;  Wang, Jianming;  Hu, Shengwei;  Li, Cunyuan;  Yang, Hui;  Jiang, Lin;  Li, Guangyu;  Liu, Mingjun;  Sonstegard, Tad S.;  Zhang, Guojie;  Jiang, Yu;  Wang, Wen;  Qiu, Qiang
收藏  |  浏览/下载:13/0  |  提交时间:2019/11/27
Saltzman's Model. Part I: Complete Characterization of Solution Properties 期刊论文
JOURNAL OF THE ATMOSPHERIC SCIENCES, 2019, 76 (6) : 1587-1608
作者:  Lakshmivarahan, S.;  Lewis, John M.;  Hu, Junjun
收藏  |  浏览/下载:5/0  |  提交时间:2019/11/26
Differential equations  Spectral analysis  models  distribution  
Estimations of global shortwave direct aerosol radiative effects above opaque water clouds using a combination of A-Train satellite sensors 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2019, 19 (7) : 4933-4962
作者:  Kacenelenbogen, Meloe S.;  Vaughan, Mark A.;  Redemann, Jens;  Young, Stuart A.;  Liu, Zhaoyan;  Hu, Yongxiang;  Omar, Ali H.;  LeBlanc, Samuel;  Shinozuka, Yohei;  Livingston, John;  Zhang, Qin;  Powell, Kathleen A.
收藏  |  浏览/下载:9/0  |  提交时间:2019/11/26
Evidence for hormonal control of heart regenerative capacity during endothermy acquisition 期刊论文
SCIENCE, 2019, 364 (6436) : 184-+
作者:  Hirose, Kentaro;  Payumo, Alexander Y.;  Cutie, Stephen;  Hoang, Alison;  Zhang, Hao;  Guyot, Romain;  Lunn, Dominic;  Bigley, Rachel B.;  Yu, Hongyao;  Wang, Jiajia;  Smith, Megan;  Gillett, Ellen;  Muroy, Sandra E.;  Schmid, Tobias;  Wilson, Emily;  Field, Kenneth A.;  Reeder, DeeAnn M.;  Maden, Malcom;  Yartsev, Michael M.;  Wolfgang, Michael J.;  Grutzner, Frank;  Scanlan, Thomas S.;  Szweda, Luke I.;  Buffenstein, Rochelle;  Hu, Guang;  Flamant, Frederic;  Olgin, Jeffrey E.;  Huang, Guo N.
收藏  |  浏览/下载:12/0  |  提交时间:2019/11/27