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A plant genetic network for preventing dysbiosis in the phyllosphere 期刊论文
NATURE, 2020, 580 (7805) : 653-+
作者:  van den Brink, Susanne C.;  Alemany, Anna;  van Batenburg, Vincent;  Moris, Naomi;  Blotenburg, Marloes;  Vivie, Judith;  Baillie-Johnson, Peter;  Nichols, Jennifer;  Sonnen, Katharina F.;  Martinez Arias, Alfonso;  van Oudenaarden, Alexander
收藏  |  浏览/下载:59/0  |  提交时间:2020/07/03

Mutations in genes involved in immune signalling and vesicle trafficking cause defects in the leaf microbiome of Arabidopsis thaliana that result in damage to leaf tissues, suggesting mechanisms by which terrestrial plants control the level and diversity of endophytic phyllosphere microbiota.


The aboveground parts of terrestrial plants, collectively called the phyllosphere, have a key role in the global balance of atmospheric carbon dioxide and oxygen. The phyllosphere represents one of the most abundant habitats for microbiota colonization. Whether and how plants control phyllosphere microbiota to ensure plant health is not well understood. Here we show that the Arabidopsis quadruple mutant (min7 fls2 efr cerk1  hereafter, mfec)(1), simultaneously defective in pattern-triggered immunity and the MIN7 vesicle-trafficking pathway, or a constitutively activated cell death1 (cad1) mutant, carrying a S205F mutation in a membrane-attack-complex/perforin (MACPF)-domain protein, harbour altered endophytic phyllosphere microbiota and display leaf-tissue damage associated with dysbiosis. The Shannon diversity index and the relative abundance of Firmicutes were markedly reduced, whereas Proteobacteria were enriched in the mfec and cad1(S205F) mutants, bearing cross-kingdom resemblance to some aspects of the dysbiosis that occurs in human inflammatory bowel disease. Bacterial community transplantation experiments demonstrated a causal role of a properly assembled leaf bacterial community in phyllosphere health. Pattern-triggered immune signalling, MIN7 and CAD1 are found in major land plant lineages and are probably key components of a genetic network through which terrestrial plants control the level and nurture the diversity of endophytic phyllosphere microbiota for survival and health in a microorganism-rich environment.


  
Effects of 21st-century climate, land use, and disturbances on ecosystem carbon balance in California 期刊论文
GLOBAL CHANGE BIOLOGY, 2019, 25 (10) : 3334-3353
作者:  Sleeter, Benjamin M.;  Marvin, David C.;  Cameron, D. Richard;  Selmants, Paul C.;  Westerline, A. LeRoy;  Kreitler, Jason;  Daniel, Colin J.;  Liu, Jinxun;  Wilson, Tamara S.
收藏  |  浏览/下载:6/0  |  提交时间:2019/11/27
California  carbon balance  climate change  disturbance  land use  scenarios  
Radiative forcing of methane fluxes offsets net carbon dioxide uptake for a tropical flooded forest 期刊论文
GLOBAL CHANGE BIOLOGY, 2019, 25 (6) : 1967-1981
作者:  Dalmagro, Higo J.;  Zanella de Arruda, Paulo H.;  Vourlitis, George L.;  Lathuilliere, Michael J.;  Nogueira, Jose de S.;  Couto, Eduardo G.;  Johnson, Mark S.
收藏  |  浏览/下载:13/0  |  提交时间:2019/11/26
CH4 and CO2 fluxes  Eddy-covariance  global change  greenhouse gas balance  hyperseasonal savanna  net ecosystem carbon balance  tropical wetlands  
Multi-year net ecosystem carbon balance of a restored peatland reveals a return to carbon sink 期刊论文
GLOBAL CHANGE BIOLOGY, 2018, 24 (12) : 5751-5768
作者:  Nugent, Kelly A.;  Strachan, Ian B.;  Strack, Maria;  Roulet, Nigel T.;  Rochefort, Line
收藏  |  浏览/下载:8/0  |  提交时间:2019/04/09
carbon dioxide  eddy covariance  methane  net ecosystem carbon balance  peatland restoration  
Chinese cropping systems are a net source of greenhouse gases despite soil carbon sequestration 期刊论文
GLOBAL CHANGE BIOLOGY, 2018, 24 (12) : 5590-5606
作者:  Gao, Bing;  Huang, Tao;  Ju, Xiaotang;  Gu, Baojing;  Huang, Wei;  Xu, Lilai;  Rees, Robert M.;  Powlson, David S.;  Smith, Pete;  Cui, Shenghui
收藏  |  浏览/下载:8/0  |  提交时间:2019/04/09
agronomic management  life cycle analysis  N2O and CH4 emission  net greenhouse gas balance  soil organic carbon  upstream CO2 emissions  
Tundra landscape heterogeneity, not interannual variability, controls the decadal regional carbon balance in the Western Russian Arctic 期刊论文
GLOBAL CHANGE BIOLOGY, 2018, 24 (11) : 5188-5204
作者:  Treat, Claire C.;  Marushchak, Maija E.;  Voigt, Carolina;  Zhang, Yu;  Tan, Zeli;  Zhuang, Qianlai;  Virtanen, Tarmo A.;  Rasanen, Aleksi;  Biasi, Christina;  Hugelius, Gustaf;  Kaverin, Dmitry;  Miller, Paul A.;  Stendel, Martin;  Romanovsky, Vladimir;  Rivkin, Felix;  Martikainen, Pertti J.;  Shurpali, Narasinha J.
收藏  |  浏览/下载:7/0  |  提交时间:2019/04/09
ecosystem modeling  methane  net ecosystem CO2 exchange  peatland  permafrost  regional carbon balance  Russia  Tundra  
Soil properties and sediment accretion modulate methane fluxes from restored wetlands 期刊论文
GLOBAL CHANGE BIOLOGY, 2018, 24 (9) : 4107-4121
作者:  Chamberlain, Samuel D.;  Anthony, Tyler L.;  Silver, Whendee L.;  Eichelmann, Elke;  Hemes, Kyle S.;  Oikawa, Patricia Y.;  Sturtevant, Cove;  Szutu, Daphne J.;  Verfaillie, Joseph G.;  Baldocchi, Dennis D.
收藏  |  浏览/下载:11/0  |  提交时间:2019/04/09
alternative electron acceptor  carbon flux  eddy covariance  greenhouse gas balance  information theory  peatland  redox  Sacramento-San Joaquin Delta  
Cover crops mitigate direct greenhouse gases balance but reduce drainage under climate change scenarios in temperate climate with dry summers 期刊论文
GLOBAL CHANGE BIOLOGY, 2018, 24 (6) : 2513-2529
作者:  Tribouillois, Helene;  Constantin, Julie;  Justes, Eric
收藏  |  浏览/下载:6/0  |  提交时间:2019/04/09
carbon  catch crop  evapotranspiration  N2O  simulation  STICS model  water balance  
Land use strategies to mitigate climate change in carbon dense temperate forests 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2018, 115 (14) : 3663-3668
作者:  Law, Beverly E.;  Hudiburg, Tara W.;  Berner, Logan T.;  Kent, Jeffrey J.;  Buotte, Polly C.;  Harmon, Mark E.
收藏  |  浏览/下载:7/0  |  提交时间:2019/11/27
forests  carbon balance  greenhouse gas emissions  climate mitigation  
Tectonic controls on the long-term carbon isotope mass balance 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2017, 114 (17) : 4318-4323
作者:  Shields, Graham A.;  Mills, Benjamin J. W.
收藏  |  浏览/下载:4/0  |  提交时间:2019/11/27
carbon isotopes  mass balance  tectonics  carbonate weathering  long-term carbon cycle