GSTDTAP  > 资源环境科学
DOI10.1038/s41467-019-10883-w
Phylodynamic assessment of intervention strategies for the West African Ebola virus outbreak
Dellicour, Simon1; Baele, Guy1; Dudas, Gytis2; Faria, Nuno R.3; Pybus, Oliver G.3; Suchard, Marc A.4,5,6; Rambaut, Andrew7,8; Lemey, Philippe1
2019-06-28
发表期刊NATURE COMMUNICATIONS
ISSN2041-1723
出版年2018
卷号9
文章类型Article
语种英语
国家Belgium; USA; England; Scotland
英文摘要

Genetic analyses have provided important insights into Ebola virus spread during the recent West African outbreak, but their implications for specific intervention scenarios remain unclear. Here, we address this issue using a collection of phylodynamic approaches. We show that long-distance dispersal events were not crucial for epidemic expansion and that preventing viral lineage movement to any given administrative area would, in most cases, have had little impact. However, major urban areas were critical in attracting and disseminating the virus: preventing viral lineage movement to all three capitals simultaneously would have contained epidemic size to one-third. We also show that announcements of border closures were followed by a significant but transient effect on international virus dispersal. By quantifying the hypothetical impact of different intervention strategies, as well as the impact of barriers on dispersal frequency, our study illustrates how phylodynamic analyses can help to address specific epidemiological and outbreak control questions.


领域资源环境
收录类别SCI-E
WOS记录号WOS:000434644000001
WOS关键词REAL-TIME ; DYNAMICS ; EVOLUTION ; SPREAD ; TRANSMISSION ; EPIDEMIOLOGY ; SURVEILLANCE ; SEQUENCES ; INFERENCE ; MODEL
WOS类目Multidisciplinary Sciences
WOS研究方向Science & Technology - Other Topics
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文献类型期刊论文
条目标识符http://119.78.100.173/C666/handle/2XK7JSWQ/204437
专题资源环境科学
作者单位1.Univ Leuven, KU Leuven, Rega Inst, Dept Microbiol & Immunol, Herestr 49, B-3000 Leuven, Belgium;
2.Fred Hutchinson Canc Res Ctr, 1100 Fairview Ave N, Seattle, WA 98109 USA;
3.Univ Oxford, Dept Zool, Oxford OX1 3PS, England;
4.Univ Calif Los Angeles, Fielding Sch Publ Hlth, Dept Biostat, Los Angeles, CA 90095 USA;
5.Univ Calif Los Angeles, David Geffen Sch Med, Dept Biomath, Los Angeles, CA 90095 USA;
6.Univ Calif Los Angeles, David Geffen Sch Med, Dept Human Genet, Los Angeles, CA 90095 USA;
7.Univ Edinburgh, Inst Evolutionary Biol, Kings Bldg, Edinburgh EH9 3FL, Midlothian, Scotland;
8.NIH, Fogarty Int Ctr, Bldg 10, Bethesda, MD 20892 USA
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GB/T 7714
Dellicour, Simon,Baele, Guy,Dudas, Gytis,et al. Phylodynamic assessment of intervention strategies for the West African Ebola virus outbreak[J]. NATURE COMMUNICATIONS,2019,9.
APA Dellicour, Simon.,Baele, Guy.,Dudas, Gytis.,Faria, Nuno R..,Pybus, Oliver G..,...&Lemey, Philippe.(2019).Phylodynamic assessment of intervention strategies for the West African Ebola virus outbreak.NATURE COMMUNICATIONS,9.
MLA Dellicour, Simon,et al."Phylodynamic assessment of intervention strategies for the West African Ebola virus outbreak".NATURE COMMUNICATIONS 9(2019).
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