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DOI | 10.1016/j.foreco.2016.10.032 |
Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL | |
Suga, Michihiro1,2; Akita, Fusamichi1,2,3; Sugahara, Michihiro4; Kubo, Minoru3,4; Nakajima, Yoshiki1,2; Nakane, Takanori5; Yamashita, Keitaro4; Umena, Yasufumi1,2; Nakabayashi, Makoto1,2; Yamane, Takahiro1,2; Nakano, Takamitsu1,2; Suzuki, Mamoru4,6; Masuda, Tetsuya4,7; Inoue, Shigeyuki4,8; Kimura, Tetsunari4,9; Nomura, Takashi4; Yonekura, Shinichiro1,2; Yu, Long-Jiang1,2; Sakamoto, Tomohiro1,2; Motomura, Taiki1,2,10; Chen, Jing-Hua1,2,11; Kato, Yuki12; Noguchi, Takumi12; Tono, Kensuke13; Joti, Yasumasa13; Kameshima, Takashi; Hatsui, Takaki4; Nango, Eriko4,14; Tanaka, Rie4; Naitow, Hisashi4; Matsuura, Yoshinori4; Yamashita, Ayumi4; Yamamoto, Masaki4; Nureki, Osamu5; Yabashi, Makina4; Ishikawa, Tetsuya4; Iwata, So2,4; Shen, Jian-Ren1,2,10,11 | |
2017-03-02 | |
发表期刊 | NATURE
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ISSN | 0028-0836 |
EISSN | 1476-4687 |
出版年 | 2017 |
卷号 | 543期号:7643页码:131-+ |
文章类型 | Article |
语种 | 英语 |
国家 | Japan; Peoples R China |
英文摘要 | Photosystem II (PSII) is a huge membrane-protein complex consisting of 20 different subunits with a total molecular mass of 350 kDa for a monomer. It catalyses light-driven water oxidation at its catalytic centre, the oxygen-evolving complex (OEC)(1-3). The structure of PSII has been analysed at 1.9 angstrom resolution by synchrotron radiation X-rays, which revealed that the OEC is a Mn4CaO5 cluster organized in an asymmetric, `distorted-chair' form(4). This structure was further analysed with femtosecond X-ray free electron lasers (XFEL), providing the `radiation damage-free'(5) structure. The mechanism of O=O bond formation, however, remains obscure owing to the lack of intermediate-state structures. Here we describe the structural changes in PSII induced by two-flash illumination at room temperature at a resolution of 2.35 angstrom using time-resolved serial femtosecond crystallography with an XFEL provided by the SPring-8 angstrom compact free-electron laser. An isomorphous difference Fourier map between the two-flash and dark-adapted states revealed two areas of apparent changes: around the QB/non-haem iron and the Mn4CaO5 cluster. The changes around the QB/non-haem iron region reflected the electron and proton transfers induced by the two-flash illumination. In the region around the OEC, a water molecule located 3.5 angstrom from the Mn4CaO5 cluster disappeared from the map upon two-flash illumination. This reduced the distance between another water molecule and the oxygen atom O4, suggesting that proton transfer also occurred. Importantly, the two-flash-minus-dark isomorphous difference Fourier map showed an apparent positive peak around O5, a unique mu 4-oxo-bridge located in the quasi-centre of Mn1 and Mn4 (refs 4,5). This suggests the insertion of a new oxygen atom (O6) close to O5, providing an O=O distance of 1.5 angstrom between these two oxygen atoms. This provides a mechanism for the O=O bond formation consistent with that proposed previously(6,7.) |
领域 | 地球科学 ; 气候变化 ; 资源环境 |
收录类别 | SCI-E |
WOS记录号 | WOS:000395671500047 |
WOS关键词 | OXYGEN-EVOLVING COMPLEX ; X-RAY-DIFFRACTION ; PHOTOSYNTHETIC WATER OXIDATION ; PHOTOSYSTEM-II ; INFRARED DETECTION ; OXIDIZING COMPLEX ; PROTON RELEASE ; MECHANISM ; STATE ; BINDING |
WOS类目 | Multidisciplinary Sciences |
WOS研究方向 | Science & Technology - Other Topics |
引用统计 | |
文献类型 | 期刊论文 |
条目标识符 | http://119.78.100.173/C666/handle/2XK7JSWQ/23319 |
专题 | 气候变化 |
作者单位 | 1.Okayama Univ, Res Inst Interdisciplinary Sci, 3-1-1 Tsushima Naka, Okayama 7008530, Japan; 2.Okayama Univ, Grad Sch Nat Sci & Technol, 3-1-1 Tsushima Naka, Okayama 7008530, Japan; 3.Japan Sci & Technol Agcy, PRESTO, 4-1-8 Honcho, Kawaguchi, Saitama 3320012, Japan; 4.RIKEN, SPring Ctr 8, 1-1-1 Kouto,Sayo Cho, Mikazuki, Hyogo 6795148, Japan; 5.Univ Tokyo, Grad Sch Sci, Dept Biol Sci, Bunkyo Ku, 2-11-16 Yayoi, Tokyo 1130032, Japan; 6.Osaka Univ, Inst Prot Res, Suita, Osaka 5650871, Japan; 7.Kyoto Univ, Grad Sch Agr, Div Food Sci & Biotechnol, Uji, Kyoto 6110011, Japan; 8.Univ Tokyo, Grad Sch Med, Dept Cell Biol & Anat, Bunkyo Ku, Hongo, Tokyo 1130033, Japan; 9.Kobe Univ, Grad Sch Sci, Dept Chem, Nada Ku, 1-1 Rokkodai, Kobe, Hyogo 6578501, Japan; 10.Univ Hyogo, Grad Sch Life Sci, Dept Picobiol, 3-2-1 Kouto,Kamigori Cho, Kobe, Hyogo 6781297, Japan; 11.Chinese Acad Sci, Inst Bot, Key Lab Photobiol, 20 Nanxincun, Beijing 100093, Peoples R China; 12.Nagoya Univ, Grad Sch Sci, Div Mat Sci, Chikusa Ku, Furo Cho, Nagoya, Aichi 4648602, Japan; 13.Japan Synchrotron Radiat Res Inst, 1-1-1 Kouto, Sayo, Hyogo 6795198, Japan; 14.Kyoto Univ, Grad Sch Med, Dept Cell Biol, Sakyo Ku, Yoshidakonoe Cho, Kyoto 6068501, Japan |
推荐引用方式 GB/T 7714 | Suga, Michihiro,Akita, Fusamichi,Sugahara, Michihiro,et al. Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL[J]. NATURE,2017,543(7643):131-+. |
APA | Suga, Michihiro.,Akita, Fusamichi.,Sugahara, Michihiro.,Kubo, Minoru.,Nakajima, Yoshiki.,...&Shen, Jian-Ren.(2017).Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL.NATURE,543(7643),131-+. |
MLA | Suga, Michihiro,et al."Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL".NATURE 543.7643(2017):131-+. |
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