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Coronavirus vaccines: key questions 期刊论文
NATURE, 2020, 579 (7800) : 481-481
作者:  Esposito, Elga;  Li, Wenlu;  T. Mandeville, Emiri;  Park, Ji-Hyun;  Sencan, Ikbal;  Guo, Shuzhen;  Shi, Jingfei;  Lan, Jing;  Lee, Janice;  Hayakawa, Kazuhide;  Sakadzic, Sava;  Ji, Xunming;  Lo, Eng H.
收藏  |  浏览/下载:12/0  |  提交时间:2020/07/03

Some experts warn that accelerated testing will involve some risky trade-offs.


Some experts warn that accelerated testing will involve some risky trade-offs.


  
Feedback generates a second receptive field in neurons of the visual cortex 期刊论文
NATURE, 2020
作者:  Shi, Enzheng;  Yuan, Biao;  Shiring, Stephen B.;  Gao, Yao;  Akriti;  Guo, Yunfan;  Su, Cong;  Lai, Minliang;  Yang, Peidong;  Kong, Jing;  Savoie, Brett M.;  Yu, Yi;  Dou, Letian
收藏  |  浏览/下载:45/0  |  提交时间:2020/07/03

Animals sense the environment through pathways that link sensory organs to the brain. In the visual system, these feedforward pathways define the classical feedforward receptive field (ffRF), the area in space in which visual stimuli excite a neuron(1). The visual system also uses visual context-the visual scene surrounding a stimulus-to predict the content of the stimulus(2), and accordingly, neurons have been identified that are excited by stimuli outside their ffRF(3-8). However, the mechanisms that generate excitation to stimuli outside the ffRF are unclear. Here we show that feedback projections onto excitatory neurons in the mouse primary visual cortex generate a second receptive field that is driven by stimuli outside the ffRF. The stimulation of this feedback receptive field (fbRF) elicits responses that are slower and are delayed in comparison with those resulting from the stimulation of the ffRF. These responses are preferentially reduced by anaesthesia and by silencing higher visual areas. Feedback inputs from higher visual areas have scattered receptive fields relative to their putative targets in the primary visual cortex, which enables the generation of the fbRF. Neurons with fbRFs are located in cortical layers that receive strong feedback projections and are absent in the main input layer, which is consistent with a laminar processing hierarchy. The observation that large, uniform stimuli-which cover both the fbRF and the ffRF-suppress these responses indicates that the fbRF and the ffRF are mutually antagonistic. Whereas somatostatin-expressing inhibitory neurons are driven by these large stimuli, inhibitory neurons that express parvalbumin and vasoactive intestinal peptide have mutually antagonistic fbRF and ffRF, similar to excitatory neurons. Feedback projections may therefore enable neurons to use context to estimate information that is missing from the ffRF and to report differences in stimulus features across visual space, regardless of whether excitation occurs inside or outside the ffRF. By complementing the ffRF, the fbRF that we identify here could contribute to predictive processing.


Feedback projections onto neurons of the mouse primary visual cortex generate a second excitatory receptive field that is driven by stimuli outside of the classical feedforward receptive field, with responses mediated by higher visual areas.


  
Action of a minimal contractile bactericidal nanomachine 期刊论文
NATURE, 2020, 580 (7805) : 658-+
作者:  Peng, Ruchao;  Xu, Xin;  Jing, Jiamei;  Wang, Min;  Peng, Qi;  Liu, Sheng;  Wu, Ying;  Bao, Xichen;  Wang, Peiyi;  Qi, Jianxun;  Gao, George F.;  Shi, Yi
收藏  |  浏览/下载:13/0  |  提交时间:2020/07/03

The authors report near-atomic resolution structures of the R-type bacteriocin from Pseudomonas aeruginosa in the pre-contraction and post-contraction states, and these structures provide insight into the mechanism of action of molecular syringes.


R-type bacteriocins are minimal contractile nanomachines that hold promise as precision antibiotics(1-4). Each bactericidal complex uses a collar to bridge a hollow tube with a contractile sheath loaded in a metastable state by a baseplate scaffold(1,2). Fine-tuning of such nucleic acid-free protein machines for precision medicine calls for an atomic description of the entire complex and contraction mechanism, which is not available from baseplate structures of the (DNA-containing) T4 bacteriophage(5). Here we report the atomic model of the complete R2 pyocin in its pre-contraction and post-contraction states, each containing 384 subunits of 11 unique atomic models of 10 gene products. Comparison of these structures suggests the following sequence of events during pyocin contraction: tail fibres trigger lateral dissociation of baseplate triplexes  the dissociation then initiates a cascade of events leading to sheath contraction  and this contraction converts chemical energy into mechanical force to drive the iron-tipped tube across the bacterial cell surface, killing the bacterium.


  
A simple dynamic model explains the diversity of island birds worldwide 期刊论文
NATURE, 2020
作者:  Li, Junxue;  Wilson, C. Blake;  Cheng, Ran;  Lohmann, Mark;  Kavand, Marzieh;  Yuan, Wei;  Aldosary, Mohammed;  Agladze, Nikolay;  Wei, Peng;  Sherwin, Mark S.;  Shi, Jing
收藏  |  浏览/下载:13/0  |  提交时间:2020/07/03

Colonization, speciation and extinction are dynamic processes that influence global patterns of species richness(1-6). Island biogeography theory predicts that the contribution of these processes to the accumulation of species diversity depends on the area and isolation of the island(7,8). Notably, there has been no robust global test of this prediction for islands where speciation cannot be ignored(9), because neither the appropriate data nor the analytical tools have been available. Here we address both deficiencies to reveal, for island birds, the empirical shape of the general relationships that determine how colonization, extinction and speciation rates co-vary with the area and isolation of islands. We compiled a global molecular phylogenetic dataset of birds on islands, based on the terrestrial avifaunas of 41 oceanic archipelagos worldwide (including 596 avian taxa), and applied a new analysis method to estimate the sensitivity of island-specific rates of colonization, speciation and extinction to island features (area and isolation). Our model predicts-with high explanatory power-several global relationships. We found a decline in colonization with isolation, a decline in extinction with area and an increase in speciation with area and isolation. Combining the theoretical foundations of island biogeography(7,8) with the temporal information contained in molecular phylogenies(10) proves a powerful approach to reveal the fundamental relationships that govern variation in biodiversity across the planet.


Using a global molecular phylogenetic dataset of birds on islands, the sensitivity of island-specific rates of colonization, speciation and extinction to island features (area and isolation) is estimated.


  
Summer Temperature over the Tibetan Plateau Modulated by Atlantic Multidecadal Variability 期刊论文
JOURNAL OF CLIMATE, 2019, 32 (13) : 4055-4067
作者:  Shi, Chunming;  Sun, Cheng;  Wu, Guocan;  Wu, Xiuchen;  Chen, Deliang;  Masson-Delmotte, Valerie;  Li, Jianping;  Xue, Jiaqing;  Li, Zongshan;  Ji, Duoying;  Zhang, Jing;  Fan, Zexin;  Shen, Miaogen;  Shu, Lifu;  Ciais, Philippe
收藏  |  浏览/下载:11/0  |  提交时间:2019/11/27
Atlantic Ocean  Atmosphere-ocean interaction  Paleoclimate  Temperature  Multidecadal variability  
Change in the spatiotemporal pattern of snowfall during the cold season under climate change in a snow-dominated region of China 期刊论文
INTERNATIONAL JOURNAL OF CLIMATOLOGY, 2019
作者:  Bai, Lei;  Shi, Chunxiang;  Shi, Qingdong;  Li, Lanhai;  Wu, Jing;  Yang, Yanfen;  Sun, Shuai;  Zhang, Feiyun;  Meng, Junyao
收藏  |  浏览/下载:8/0  |  提交时间:2019/11/26
northeast China  precipitation phase  Qinghai-Tibet Plateau  warming  Xinjiang  
Effects of snow cover on urban surface energy exchange: Observations in Harbin, China during the winter season 期刊论文
INTERNATIONAL JOURNAL OF CLIMATOLOGY, 2019, 39 (3) : 1230-1242
作者:  Shui, Taotao;  Liu, Jing;  Xiao, Ye;  Shi, Luyang
收藏  |  浏览/下载:2/0  |  提交时间:2019/04/09
eddy covariance  energy balance  snow cover  urban climate  
Footprints of Atlantic Multidecadal Oscillation in the Low-Frequency Variation of Extreme High Temperature in the Northern Hemisphere 期刊论文
JOURNAL OF CLIMATE, 2019, 32 (3) : 791-802
作者:  Gao, Miaoni;  Yang, Jing;  Gong, Daoyi;  Shi, Peijun;  Han, Zhangang;  Kim, Seong-Joong
收藏  |  浏览/下载:4/0  |  提交时间:2019/04/09
Atmosphere  Extreme events  Climate variability  Decadal variability  Oscillations  
Comprehensive functional genomic resource and integrative model for the human brain 期刊论文
SCIENCE, 2018, 362 (6420) : 1266-+
作者:  Wang, Daifeng;  Liu, Shuang;  Warrell, Jonathan;  Won, Hyejung;  Shi, Xu;  Navarro, Fabio C. P.;  Clarke, Declan;  Gu, Mengting;  Emani, Prashant;  Yang, Yucheng T.;  Xu, Min;  Gandal, Michael J.;  Lou, Shaoke;  Zhang, Jing;  Park, Jonathan J.;  Yan, Chengfei;  Rhie, Suhn Kyong;  Manakongtreecheep, Kasidet;  Zhou, Holly;  Nathan, Aparna;  Peters, Mette;  Mattei, Eugenio;  Fitzgerald, Dominic;  Brunetti, Tonya;  Moore, Jill;  Jiang, Yan;  Girdhar, Kiran;  Hoffman, Gabriel E.;  Kalayci, Selim;  Gumus, Zeynep H.;  Crawford, Gregory E.;  Roussos, Panos;  Akbarian, Schahram;  Jaffe, Andrew E.;  White, Kevin P.;  Weng, Zhiping;  Sestan, Nenad;  Geschwind, Daniel H.;  Knowles, James A.;  Gerstein, Mark B.
收藏  |  浏览/下载:13/0  |  提交时间:2019/11/27
Vertically Distributed Sensing of Deformation Using Fiber Optic Sensing 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2018, 45 (21) : 11732-11741
作者:  Zhang, Cheng-Cheng;  Shi, Bin;  Gu, Kai;  Liu, Su-Ping;  Wu, Jing-Hong;  Zhang, Song;  Zhang, Lei;  Jiang, Hong-Tao;  Wei, Guang-Qing
收藏  |  浏览/下载:7/0  |  提交时间:2019/04/09