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Autophagy promotes immune evasion of pancreatic cancer by degrading MHC-I 期刊论文
NATURE, 2020, 581 (7806) : 100-+
作者:  Waszak, Sebastian M.;  Robinson, Giles W.;  Gudenas, Brian L.;  Smith, Kyle S.;  Forget, Antoine;  Kojic, Marija;  Garcia-Lopez, Jesus;  Hadley, Jennifer;  Hamilton, Kayla V.;  Indersie, Emilie;  Buchhalter, Ivo;  Kerssemakers, Jules;  Jager, Natalie;  Sharma, Tanvi;  Rausch, Tobias;  Kool, Marcel;  Sturm, Dominik;  Jones, David T. W.;  Vasilyeva, Aksana;  Tatevossian, Ruth G.;  Neale, Geoffrey;  Lombard, Berangere;  Loew, Damarys;  Nakitandwe, Joy;  Rusch, Michael;  Bowers, Daniel C.;  Bendel, Anne;  Partap, Sonia;  Chintagumpala, Murali;  Crawford, John;  Gottardo, Nicholas G.;  Smith, Amy;  Dufour, Christelle;  Rutkowski, Stefan;  Eggen, Tone;  Wesenberg, Finn;  Kjaerheim, Kristina;  Feychting, Maria;  Lannering, Birgitta;  Schuz, Joachim;  Johansen, Christoffer;  Andersen, Tina V.;  Roosli, Martin;  Kuehni, Claudia E.;  Grotzer, Michael;  Remke, Marc;  Puget, Stephanie;  Pajtler, Kristian W.;  Milde, Till;  Witt, Olaf;  Ryzhova, Marina;  Korshunov, Andrey;  Orr, Brent A.;  Ellison, David W.;  Brugieres, Laurence;  Lichter, Peter;  Nichols, Kim E.;  Gajjar, Amar;  Wainwright, Brandon J.;  Ayrault, Olivier;  Korbel, Jan O.;  Northcott, Paul A.;  Pfister, Stefan M.
收藏  |  浏览/下载:39/0  |  提交时间:2020/07/03

Immune evasion is a major obstacle for cancer treatment. Common mechanisms of evasion include impaired antigen presentation caused by mutations or loss of heterozygosity of the major histocompatibility complex class I (MHC-I), which has been implicated in resistance to immune checkpoint blockade (ICB) therapy(1-3). However, in pancreatic ductal adenocarcinoma (PDAC), which is resistant to most therapies including ICB4, mutations that cause loss of MHC-I are rarely found(5) despite the frequent downregulation of MHC-I expression(6-8). Here we show that, in PDAC, MHC-I molecules are selectively targeted for lysosomal degradation by an autophagy-dependent mechanism that involves the autophagy cargo receptor NBR1. PDAC cells display reduced expression of MHC-I at the cell surface and instead demonstrate predominant localization within autophagosomes and lysosomes. Notably, inhibition of autophagy restores surface levels of MHC-I and leads to improved antigen presentation, enhanced anti-tumour T cell responses and reduced tumour growth in syngeneic host mice. Accordingly, the anti-tumour effects of autophagy inhibition are reversed by depleting CD8(+) T cells or reducing surface expression of MHC-I. Inhibition of autophagy, either genetically or pharmacologically with chloroquine, synergizes with dual ICB therapy (anti-PD1 and anti-CTLA4 antibodies), and leads to an enhanced anti-tumour immune response. Our findings demonstrate a role for enhanced autophagy or lysosome function in immune evasion by selective targeting of MHC-I molecules for degradation, and provide a rationale for the combination of autophagy inhibition and dual ICB therapy as a therapeutic strategy against PDAC.


Inhibition of the autophagy-lysosome system upregulates surface expression of MHC class I proteins and enhances antigen presentation, and evokes a potent anti-tumour immune response that is mediated by CD8(+) T cells.


  
Pharmacologic fibroblast reprogramming into photoreceptors restores vision 期刊论文
NATURE, 2020, 581 (7806) : 83-+
作者:  Jiang, Mingkai;  Medlyn, Belinda E.;  Drake, John E.;  Duursma, Remko A.;  Anderson, Ian C.;  Barton, Craig V. M.;  Boer, Matthias M.;  Carrillo, Yolima;  Castaneda-Gomez, Laura;  Collins, Luke;  Crous, Kristine Y.;  De Kauwe, Martin G.;  dos Santos, Bruna M.;  Emmerson, Kathryn M.;  Facey, Sarah L.;  Gherlenda, Andrew N.;  Gimeno, Teresa E.;  Hasegawa, Shun;  Johnson, Scott N.;  Kannaste, Astrid;  Macdonald, Catriona A.;  Mahmud, Kashif;  Moore, Ben D.;  Nazaries, Loic;  Neilson, Elizabeth H. J.;  Nielsen, Uffe N.;  Niinemets, Ulo;  Noh, Nam Jin;  Ochoa-Hueso, Raul;  Pathare, Varsha S.;  Pendall, Elise;  Pihlblad, Johanna;  Pineiro, Juan;  Powell, Jeff R.;  Power, Sally A.;  Reich, Peter B.;  Renchon, Alexandre A.;  Riegler, Markus;  Rinnan, Riikka;  Rymer, Paul D.;  Salomon, Roberto L.;  Singh, Brajesh K.;  Smith, Benjamin;  Tjoelker, Mark G.;  Walker, Jennifer K. M.;  Wujeska-Klause, Agnieszka;  Yang, Jinyan;  Zaehle, Soenke;  Ellsworth, David S.
收藏  |  浏览/下载:46/0  |  提交时间:2020/07/03

Photoreceptor loss is the final common endpoint in most retinopathies that lead to irreversible blindness, and there are no effective treatments to restore vision(1,2). Chemical reprogramming of fibroblasts offers an opportunity to reverse vision loss  however, the generation of sensory neuronal subtypes such as photoreceptors remains a challenge. Here we report that the administration of a set of five small molecules can chemically induce the transformation of fibroblasts into rod photoreceptor-like cells. The transplantation of these chemically induced photoreceptor-like cells (CiPCs) into the subretinal space of rod degeneration mice (homozygous for rd1, also known as Pde6b) leads to partial restoration of the pupil reflex and visual function. We show that mitonuclear communication is a key determining factor for the reprogramming of fibroblasts into CiPCs. Specifically, treatment with these five compounds leads to the translocation of AXIN2 to the mitochondria, which results in the production of reactive oxygen species, the activation of NF-kappa B and the upregulation of Ascl1. We anticipate that CiPCs could have therapeutic potential for restoring vision.


A set of five small molecules can induce the transformation of fibroblasts into rod photoreceptor-like cells, which can partially restore pupil reflex and visual function when transplanted into a rod degeneration mouse model.


  
Background levels of methane in Mars' atmosphere show strong seasonal variations 期刊论文
SCIENCE, 2018, 360 (6393) : 1093-+
作者:  Webster, Christopher R.;  Mahaffy, Paul R.;  Atreya, Sushil K.;  Moores, John E.;  Flesch, Gregory J.;  Malespin, Charles;  McKay, Christopher P.;  Martinez, German;  Smith, Christina L.;  Martin-Torres, Javier;  Gomez-Elvira, Javier;  Zorzano, Maria-Paz;  Wong, Michael H.;  Trainer, Melissa G.;  Steele, Andrew;  Archer, Doug, Jr.;  Sutter, Brad;  Coll, Patrice J.;  Freissinet, Caroline;  Meslin, Pierre-Yves;  Gough, Raina V.;  House, Christopher H.;  Pavlov, Alexander;  Eigenbrode, Jennifer L.;  Glavin, Daniel P.;  Pearson, John C.;  Keymeulen, Didier;  Christensen, Lance E.;  Schwenzer, Susanne P.;  Navarro-Gonzalez, Rafael;  Pla-Garcia, Jorge;  Rafkin, Scot C. R.;  Vicente-Retortillo, Alvaro;  Kahanpaa, Henrik;  Viudez-Moreiras, Daniel;  Smith, Michael D.;  Harri, Ari-Matti;  Genzer, Maria;  Hassler, Donald M.;  Lemmon, Mark;  Crisp, Joy;  Sander, Stanley P.;  Zurek, Richard W.;  Vasavada, Ashwin R.
收藏  |  浏览/下载:13/0  |  提交时间:2019/11/27
Increasing importance of precipitation variability on global livestock grazing lands 期刊论文
NATURE CLIMATE CHANGE, 2018, 8 (3) : 214-+
作者:  Sloat, Lindsey L.;  Gerber, James S.;  Samberg, Leah H.;  Smith, William K.;  Herrero, Mario;  Ferreira, Laerte G.;  Godde, Cecile M.;  West, Paul C.
收藏  |  浏览/下载:5/0  |  提交时间:2019/04/09
Vegetation demographics in Earth System Models: A review of progress and priorities 期刊论文
GLOBAL CHANGE BIOLOGY, 2018, 24 (1) : 35-54
作者:  Fisher, Rosie A.;  Koven, Charles D.;  Anderegg, William R. L.;  Christoffersen, Bradley O.;  Dietze, Michael C.;  Farrior, Caroline E.;  Holm, Jennifer A.;  Hurtt, George C.;  Knox, Ryan G.;  Lawrence, Peter J.;  Lichstein, Jeremy W.;  Longo, Marcos;  Matheny, Ashley M.;  Medvigy, David;  Muller-Landau, Helene C.;  Powell, Thomas L.;  Serbin, Shawn P.;  Sato, Hisashi;  Shuman, Jacquelyn K.;  Smith, Benjamin;  Trugman, Anna T.;  Viskari, Toni;  Verbeeck, Hans;  Weng, Ensheng;  Xu, Chonggang;  Xu, Xiangtao;  Zhang, Tao;  Moorcroft, Paul R.
收藏  |  浏览/下载:12/0  |  提交时间:2019/04/09
carbon cycle  demographics  dynamic global vegetation models  Earth System Model  ecosystem  vegetation  
Genome-wide meta-analysis associates HLA-DQA1/DRB1 and LPA and lifestyle factors with human longevity 期刊论文
NATURE COMMUNICATIONS, 2017, 8
作者:  Joshi, Peter K.;  Pirastu, Nicola;  Kentistou, Katherine A.;  Fischer, Krista;  Hofer, Edith;  Schraut, Katharina E.;  Clark, David W.;  Nutile, Teresa;  Barnes, Catriona L. K.;  Timmers, Paul R. H. J.;  Shen, Xia;  Gandin, Ilaria;  McDaid, Aaron F.;  Hansen, Thomas Folkmann;  Gordon, Scott D.;  Giulianini, Franco;  Boutin, Thibaud S.;  Abdellaoui, Abdel;  Zhao, Wei;  Medina-Gomez, Carolina;  Bartz, Traci M.;  Trompet, Stella;  Lange, Leslie A.;  Raffield, Laura;  van der Spek, Ashley;  Galesloot, Tessel E.;  Proitsi, Petroula;  Yanek, Lisa R.;  Bielak, Lawrence F.;  Payton, Antony;  Murgia, Federico;  Concas, Maria Pina;  Biino, Ginevra;  Tajuddin, Salman M.;  Seppala, Ilkka;  Amin, Najaf;  Boerwinkle, Eric;  Borglum, Anders D.;  Campbell, Archie;  Demerath, Ellen W.;  Demuth, Ilja;  Faul, Jessica D.;  Ford, Ian;  Gialluisi, Alessandro;  Gogele, Martin;  Graff, MariaElisa;  Hingorani, Aroon;  Hottenga, Jouke-Jan;  Hougaard, David M.;  Hurme, Mikko A.;  Ikram, M. Arfan;  Jylha, Marja;  Kuh, Diana;  Ligthart, Lannie;  Lill, Christina M.;  Lindenberger, Ulman;  Lumley, Thomas;  Magi, Reedik;  Marques-Vidal, Pedro;  Medland, Sarah E.;  Milani, Lili;  Nagy, Reka;  Ollier, William E. R.;  Peyser, Patricia A.;  Pramstaller, Peter P.;  Ridker, Paul M.;  Rivadeneira, Fernando;  Ruggiero, Daniela;  Saba, Yasaman;  Schmidt, Reinhold;  Schmidt, Helena;  Slagboom, P. Eline;  Smith, Blair H.;  Smith, Jennifer A.;  Sotoodehnia, Nona;  Steinhagen-Thiessen, Elisabeth;  van Rooij, Frank J. A.;  Verbeek, Andre L.;  Vermeulen, Sita H.;  Vollenweider, Peter;  Wang, Yunpeng;  Werge, Thomas;  Whitfield, John B.;  Zonderman, Alan B.;  Lehtimaki, Terho;  Evans, Michele K.;  Pirastu, Mario;  Fuchsberger, Christian;  Bertram, Lars;  Pendleton, Neil;  Kardia, Sharon L. R.;  Ciullo, Marina;  Becker, Diane M.;  Wong, Andrew;  Psaty, Bruce M.;  van Duijn, Cornelia M.;  Wilson, James G.;  Jukema, J. Wouter;  Kiemeney, Lambertus;  Uitterlinden, Andre G.;  Franceschini, Nora;  North, Kari E.;  Weir, David R.;  Metspalu, Andres;  Boomsma, Dorret I.;  Hayward, Caroline;  Chasman, Daniel;  Martin, Nicholas G.;  Sattar, Naveed;  Campbell, Harry;  Esko, Tonu;  Kutalik, Zoltan;  Wilson, James F.
收藏  |  浏览/下载:13/0  |  提交时间:2019/11/27
A case study of convectively sourced water vapor observed in the overworld stratosphere over the United States 期刊论文
JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES, 2017, 122 (17)
作者:  Smith, Jessica B.;  Wilmouth, David M.;  Bedka, Kristopher M.;  Bowman, Kenneth P.;  Homeyer, Cameron R.;  Dykema, John A.;  Sargent, Maryann R.;  Clapp, Corey E.;  Leroy, Stephen S.;  Sayres, David S.;  Dean-Day, Jonathan M.;  Bui, T. Paul;  Anderson, James G.
收藏  |  浏览/下载:6/0  |  提交时间:2019/04/09
Phylogenetic ctDNA analysis depicts early-stage lung cancer evolution 期刊论文
NATURE, 2017, 545 (7655) : 446-+
作者:  Abbosh, Christopher;  Birkbak, Nicolai J.;  Wilson, Gareth A.;  Jamal-Hanjani, Mariam;  Constantin, Tudor;  Salari, Raheleh;  Le Quesne, John;  Moore, David A.;  Veeriah, Selvaraju;  Rosenthal, Rachel;  Marafioti, Teresa;  Kirkizlar, Eser;  Watkins, Thomas B. K.;  McGranahan, Nicholas;  Ward, Sophia;  Martinson, Luke;  Riley, Joan;  Fraioli, Francesco;  Al Bakir, Maise;  Gronroos, Eva;  Zambrana, Francisco;  Endozo, Raymondo;  Bi, Wenya Linda;  Fennessy, Fiona M.;  Sponer, Nicole;  Johnson, Diana;  Laycock, Joanne;  Shafi, Seema;  Czyzewska-Khan, Justyna;  Rowan, Andrew;  Chambers, Tim;  Matthews, Nik;  Turajlic, Samra;  Hiley, Crispin;  Lee, Siow Ming;  Forster, Martin D.;  Ahmad, Tanya;  Falzon, Mary;  Borg, Elaine;  Lawrence, David;  Hayward, Martin;  Kolvekar, Shyam;  Panagiotopoulos, Nikolaos;  Janes, Sam M.;  Thakrar, Ricky;  Ahmed, Asia;  Blackhall, Fiona;  Summers, Yvonne;  Hafez, Dina;  Naik, Ashwini;  Ganguly, Apratim;  Kareht, Stephanie;  Shah, Rajesh;  Joseph, Leena;  Quinn, Anne Marie;  Crosbie, Phil A.;  Naidu, Babu;  Middleton, Gary;  Langman, Gerald;  Trotter, Simon;  Nicolson, Marianne;  Remmen, Hardy;  Kerr, Keith;  Chetty, Mahendran;  Gomersall, Lesley;  Fennell, Dean A.;  Nakas, Apostolos;  Rathinam, Sridhar;  Anand, Girija;  Khan, Sajid;  Russell, Peter;  Ezhil, Veni;  Ismail, Babikir;  Irvin-Sellers, Melanie;  Prakash, Vineet;  Lester, Jason F.;  Kornaszewska, Malgorzata;  Attanoos, Richard;  Adams, Haydn;  Davies, Helen;  Oukrif, Dahmane;  Akarca, Ayse U.;  Hartley, John A.;  Lowe, Helen L.;  Lock, Sara;  Iles, Natasha;  Bell, Harriet;  Ngai, Yenting;  Elgar, Greg;  Szallasi, Zoltan;  Schwarz, Roland F.;  Herrero, Javier;  Stewart, Aengus;  Quezada, Sergio A.;  Peggs, Karl S.;  Van Loo, Peter;  Dive, Caroline;  Lin, C. Jimmy;  Rabinowitz, Matthew;  Aerts, Hugo J. W. L.;  Hackshaw, Allan;  Shaw, Jacqui A.;  Zimmermann, Bernhard G.;  Swanton, Charles;  Jamal-Hanjani, Mariam;  Abbosh, Christopher;  Veeriah, Selvaraju;  Shafi, Seema;  Czyzewska-Khan, Justyna;  Johnson, Diana;  Laycock, Joanne;  Bosshard-Carter, Leticia;  Goh, Gerald;  Rosenthal, Rachel;  Gorman, Pat;  Murugaesu, Nirupa;  Hynds, Robert E.;  Wilson, Gareth A.;  Birkbak, Nicolai J.;  Watkins, Thomas B. K.;  McGranahan, Nicholas;  Horswell, Stuart;  Al Bakir, Maise;  Gronroos, Eva;  Mitter, Richard;  Escudero, Mickael;  Stewart, Aengus;  Van Loo, Peter;  Rowan, Andrew;  Xu, Hang;  Turajlic, Samra;  Hiley, Crispin;  Goldman, Jacki;  Stone, Richard Kevin;  Denner, Tamara;  Matthews, Nik;  Elgar, Greg;  Ward, Sophia;  Biggs, Jennifer;  Costa, Marta;  Begum, Sharmin;  Phillimore, Ben;  Chambers, Tim;  Nye, Emma;  Graca, Sofia;  Joshi, Kroopa;  Furness, Andrew;  Ben Aissa, Assma;  Wong, Yien Ning Sophia;  Georgiou, Andy;  Quezada, Sergio A.;  Peggs, Karl S.;  Hartley, John A.;  Lowe, Helen L.;  Herrero, Javier;  Lawrence, David;  Hayward, Martin;  Panagiotopoulos, Nikolaos;  Kolvekar, Shyam;  Falzon, Mary;  Borg, Elaine;  Marafioti, Teresa;  Simeon, Celia;  Hector, Gemma;  Smith, Amy;  Aranda, Marie;  Novelli, Marco;  Oukrif, Dahmane;  Akarca, Ayse U.;  Janes, Sam M.;  Thakrar, Ricky;  Forster, Martin D.;  Ahmad, Tanya;  Lee, Siow Ming;  Papadatos-Pastos, Dionysis;  Carnell, Dawn;  Mendes, Ruheena;  George, Jeremy;  Navani, Neal;  Ahmed, Asia;  Taylor, Magali;  Choudhary, Junaid;  Summers, Yvonne;  Califano, Raffaele;  Taylor, Paul;  Shah, Rajesh;  Krysiak, Piotr;  Rammohan, Kendadai;  Fontaine, Eustace;  Booton, Richard;  Evison, Matthew;  Crosbie, Phil A.;  Moss, Stuart;  Idries, Faiza;  Joseph, Leena;  Bishop, Paul;  Chaturvedi, Anshuman;  Quinn, Anne Marie;  Doran, Helen;  Leek, Angela;  Harrison, Phil;  Moore, Katrina;  Waddington, Rachael;  Novasio, Juliette;  Blackhall, Fiona;  Rogan, Jane;  Smith, Elaine;  Dive, Caroline;  Tugwood, Jonathan;  Brady, Ged;  Rothwell, Dominic G.;  Chemi, Francesca;  Pierce, Jackie;  Gulati, Sakshi;  Naidu, Babu;  Langman, Gerald;  Trotter, Simon;  Bellamy, Mary;  Bancroft, Hollie;  Kerr, Amy;  Kadiri, Salma;  Webb, Joanne;  Middleton, Gary;  Djearaman, Madava;  Fennell, Dean A.;  Shaw, Jacqui A.;  Le Quesne, John;  Moore, David A.;  Thomas, Anne;  Walter, Harriet;  Riley, Joan;  Martinson, Luke;  Nakas, Apostolos;  Rathinam, Sridhar;  Monteiro, William;  Marshall, Hilary;  Nelson, Louise;  Bennett, Jonathan;  Primrose, Lindsay;  Anand, Girija;  Khan, Sajid;  Amadi, Anita;  Nicolson, Marianne;  Kerr, Keith;  Palmer, Shirley;  Remmen, Hardy;  Miller, Joy;  Buchan, Keith;  Chetty, Mahendran;  Gomersall, Lesley;  Lester, Jason F.;  Edwards, Alison;  Morgan, Fiona;  Adams, Haydn;  Davies, Helen;  Kornaszewska, Malgorzata;  Attanoos, Richard;  Lock, Sara;  Verjee, Azmina;  MacKenzie, Mairead;  Wilcox, Maggie;  Bell, Harriet;  Iles, Natasha;  Hackshaw, Allan;  Ngai, Yenting;  Smith, Sean;  Gower, Nicole;  Ottensmeier, Christian;  Chee, Serena;  Johnson, Benjamin;  Alzetani, Aiman;  Shaw, Emily;  Lim, Eric;  De Sousa, Paulo;  Barbosa, Monica Tavares;  Bowman, Alex;  Jordan, Simon;  Rice, Alexandra;  Raubenheimer, Hilgardt;  Proli, Chiara;  Cufari, Maria Elena;  Ronquillo, John Carlo;  Kwayie, Angela;  Bhayani, Harshil;  Hamilton, Morag;  Bakar, Yusura;  Mensah, Natalie;  Ambrose, Lyn;  Devaraj, Anand;  Buderi, Silviu;  Finch, Jonathan;  Azcarate, Leire;  Chavan, Hema;  Green, Sophie;  Mashinga, Hillaria;  Nicholson, Andrew G.;  Lau, Kelvin;  Sheaff, Michael;  Schmid, Peter;  Conibear, John;  Ezhil, Veni;  Ismail, Babikir;  Irvin-Sellers, Melanie;  Prakash, Vineet;  Russell, Peter;  Light, Teresa;  Horey, Tracey;  Danson, Sarah;  Bury, Jonathan;  Edwards, John;  Hill, Jennifer;  Matthews, Sue;  Kitsanta, Yota;  Suvarna, Kim;  Fisher, Patricia;  Keerio, Allah Dino;  Shackcloth, Michael;  Gosney, John;  Postmus, Pieter;  Feeney, Sarah;  Asante-Siaw, Julius;  Constantin, Tudor;  Salari, Raheleh;  Sponer, Nicole;  Naik, Ashwini;  Zimmermann, Bernhard G.;  Rabinowitz, Matthew;  Aerts, Hugo J. W. L.;  Dentro, Stefan;  Dessimoz, Christophe
收藏  |  浏览/下载:28/0  |  提交时间:2019/04/09
Global warming and ocean stratification: A potential result of large extraterrestrial impacts 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2017, 44 (8)
作者:  Joshi, Manoj;  von Glasow, Roland;  Smith, Robin S.;  Paxton, Charles G. M.;  Maycock, Amanda C.;  Lunt, Daniel J.;  Loptson, Claire;  Markwick, Paul
收藏  |  浏览/下载:6/0  |  提交时间:2019/04/09
The earliest bird-line archosaurs and the assembly of the dinosaur body plan 期刊论文
NATURE, 2017, 544 (7651) : 484-+
作者:  Nesbitt, Sterling J.;  Butler, Richard J.;  Ezcurra, Martin D.;  Barrett, Paul M.;  Stocker, Michelle R.;  Angielczyk, Kenneth D.;  Smith, Roger M. H.;  Sidor, Christian A.;  Niedzwiedzki, Grzegorz;  Sennikov, Andrey G.;  Charig, Alan J.
收藏  |  浏览/下载:9/0  |  提交时间:2019/11/27