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International evaluation of an AI system for breast cancer screening 期刊论文
NATURE, 2020, 577 (7788) : 89-+
作者:  McKinney, Scott Mayer;  Sieniek, Marcin;  Godbole, Varun;  Godwin, Jonathan;  Antropova, Natasha;  Ashrafian, Hutan;  Back, Trevor;  Chesus, Mary;  Corrado, Greg C.;  Darzi, Ara;  Etemadi, Mozziyar;  Garcia-Vicente, Florencia;  Gilbert, Fiona J.;  Halling-Brown, Mark;  Hassabis, Demis;  Jansen, Sunny;  Karthikesalingam, Alan;  Kelly, Christopher J.;  King, Dominic;  Ledsam, Joseph R.;  Melnick, David;  Mostofi, Hormuz;  Peng, Lily;  Reicher, Joshua Jay;  Romera-Paredes, Bernardino;  Sidebottom, Richard;  Suleyman, Mustafa;  Tse, Daniel;  Young, Kenneth C.;  De Fauw, Jeffrey;  Shetty, Shravya
收藏  |  浏览/下载:15/0  |  提交时间:2020/07/03

Screening mammography aims to identify breast cancer at earlier stages of the disease, when treatment can be more successful(1). Despite the existence of screening programmes worldwide, the interpretation of mammograms is affected by high rates of false positives and false negatives(2). Here we present an artificial intelligence (AI) system that is capable of surpassing human experts in breast cancer prediction. To assess its performance in the clinical setting, we curated a large representative dataset from the UK and a large enriched dataset from the USA. We show an absolute reduction of 5.7% and 1.2% (USA and UK) in false positives and 9.4% and 2.7% in false negatives. We provide evidence of the ability of the system to generalize from the UK to the USA. In an independent study of six radiologists, the AI system outperformed all of the human readers: the area under the receiver operating characteristic curve (AUC-ROC) for the AI system was greater than the AUC-ROC for the average radiologist by an absolute margin of 11.5%. We ran a simulation in which the AI system participated in the double-reading process that is used in the UK, and found that the AI system maintained non-inferior performance and reduced the workload of the second reader by 88%. This robust assessment of the AI system paves the way for clinical trials to improve the accuracy and efficiency of breast cancer screening.


  
Inner ear sensory system changes as extinct crocodylomorphs transitioned from land to water 期刊论文
Proceedings of the National Academy of Science, 2020
作者:  Julia A. Schwab;  Mark T. Young;  James M. Neenan;  Stig A. Walsh;  Lawrence M. Witmer;  Yanina Herrera;  Ronan Allain;  Christopher A. Brochu;  Jonah N. Choiniere;  James M. Clark;  Kathleen N. Dollman;  Steve Etches;  Guido Fritsch;  Paul M. Gignac;  Alexander Ruebenstahl;  Sven Sachs;  Alan H. Turner;  Patrick Vignaud;  Eric W. Wilberg;  Xing Xu;  Lindsay E. Zanno;  Stephen L. Brusatte
收藏  |  浏览/下载:11/0  |  提交时间:2020/05/13
Inner ear sensory system changes as extinct crocodylomorphs transitioned from land to water 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (19) : 10422-10428
作者:  Schwab, Julia A.;  Young, Mark T.;  Neenan, James M.;  Walsh, Stig A.;  Witmer, Lawrence M.;  Herrera, Yanina;  Allain, Ronan;  Brochu, Christopher A.;  Choiniere, Jonah N.;  Clark, James M.;  Dollman, Kathleen N.;  Etches, Steve;  Fritsch, Guido;  Gignac, Paul M.;  Ruebenstahl, Alexander;  Sachs, Sven;  Turner, Alan H.;  Vignaud, Patrick;  Wilberg, Eric W.;  Xu, Xing;  Zanno, Lindsay E.;  Brusatte, Stephen L.
收藏  |  浏览/下载:9/0  |  提交时间:2020/05/13
bony labyrinth  vestibular system  morphology  thalattosuchia  CT scanning  
APOE4 leads to blood-brain barrier dysfunction predicting cognitive decline 期刊论文
NATURE, 2020, 581 (7806) : 70-+
作者:  Doherty, Tiarnan A. S.;  Winchester, Andrew J.;  Macpherson, Stuart;  Johnstone, Duncan N.;  Pareek, Vivek;  Tennyson, Elizabeth M.;  Kosar, Sofiia;  Kosasih, Felix U.;  Anaya, Miguel;  Abdi-Jalebi, Mojtaba;  Andaji-Garmaroudi, Zahra;  Wong, E. Laine;  Madeo, Julien;  Chiang, Yu-Hsien;  Park, Ji-Sang;  Jung, Young-Kwang;  Petoukhoff, Christopher E.;  Divitini, Giorgio;  Man, Michael K. L.;  Ducati, Caterina;  Walsh, Aron;  Midgley, Paul A.;  Dani, Keshav M.;  Stranks, Samuel D.
收藏  |  浏览/下载:25/0  |  提交时间:2020/07/03

Breakdown of the blood-brain barrier in individuals carrying the epsilon 4 allele of the APOE gene, but not the epsilon 3 allele, increases with and predicts cognitive impairment and is independent of amyloid beta or tau pathology.


Vascular contributions to dementia and Alzheimer'  s disease are increasingly recognized(1-6). Recent studies have suggested that breakdown of the blood-brain barrier (BBB) is an early biomarker of human cognitive dysfunction(7), including the early clinical stages of Alzheimer'  s disease(5,8-10). The E4 variant of apolipoprotein E (APOE4), the main susceptibility gene for Alzheimer'  s disease(11-14), leads to accelerated breakdown of the BBB and degeneration of brain capillary pericytes(15-19), which maintain BBB integrity(20-22). It is unclear, however, whether the cerebrovascular effects of APOE4 contribute to cognitive impairment. Here we show that individuals bearing APOE4 (with the epsilon 3/epsilon 4 or epsilon 4/epsilon 4 alleles) are distinguished from those without APOE4 (epsilon 3/epsilon 3) by breakdown of the BBB in the hippocampus and medial temporal lobe. This finding is apparent in cognitively unimpaired APOE4 carriers and more severe in those with cognitive impairment, but is not related to amyloid-beta or tau pathology measured in cerebrospinal fluid or by positron emission tomography(23). High baseline levels of the BBB pericyte injury biomarker soluble PDGFR beta(7,8) in the cerebrospinal fluid predicted future cognitive decline in APOE4 carriers but not in non-carriers, even after controlling for amyloid-beta and tau status, and were correlated with increased activity of the BBB-degrading cyclophilin A-matrix metalloproteinase-9 pathway(19) in cerebrospinal fluid. Our findings suggest that breakdown of the BBB contributes to APOE4-associated cognitive decline independently of Alzheimer'  s disease pathology, and might be a therapeutic target in APOE4 carriers.


  
Electrical manipulation of a topological antiferromagnetic state 期刊论文
NATURE, 2020, 580 (7805) : 608-+
作者:  Chabon, Jacob J.;  Hamilton, Emily G.;  Kurtz, David M.;  Esfahani, Mohammad S.;  Moding, Everett J.;  Stehr, Henning;  Schroers-Martin, Joseph;  Nabet, Barzin Y.;  Chen, Binbin;  Chaudhuri, Aadel A.;  Liu, Chih Long;  Hui, Angela B.;  Jin, Michael C.;  Azad, Tej D.;  Almanza, Diego;  Jeon, Young-Jun;  Nesselbush, Monica C.;  Keh, Lyron Co Ting;  Bonilla, Rene F.;  Yoo, Christopher H.;  Ko, Ryan B.;  Chen, Emily L.;  Merriott, David J.;  Massion, Pierre P.;  Mansfield, Aaron S.;  Jen, Jin;  Ren, Hong Z.;  Lin, Steven H.;  Costantino, Christina L.;  Burr, Risa;  Tibshirani, Robert;  Gambhir, Sanjiv S.;  Berry, Gerald J.;  Jensen, Kristin C.;  West, Robert B.;  Neal, Joel W.;  Wakelee, Heather A.;  Loo, Billy W., Jr.;  Kunder, Christian A.;  Leung, Ann N.;  Lui, Natalie S.;  Berry, Mark F.;  Shrager, Joseph B.;  Nair, Viswam S.;  Haber, Daniel A.;  Sequist, Lecia V.;  Alizadeh, Ash A.;  Diehn, Maximilian
收藏  |  浏览/下载:37/0  |  提交时间:2020/07/03

Room-temperature electrical switching of a topological antiferromagnetic state in polycrystalline Mn3Sn thin films is demonstrated using the same protocol as that used for conventional ferromagnetic metals.


Electrical manipulation of phenomena generated by nontrivial band topology is essential for the development of next-generation technology using topological protection. A Weyl semimetal is a three-dimensional gapless system that hosts Weyl fermions as low-energy quasiparticles(1-4). It has various exotic properties, such as a large anomalous Hall effect (AHE) and chiral anomaly, which are robust owing to the topologically protected Weyl nodes(1-16). To manipulate such phenomena, a magnetic version of Weyl semimetals would be useful for controlling the locations of Weyl nodes in the Brillouin zone. Moreover, electrical manipulation of antiferromagnetic Weyl metals would facilitate the use of antiferromagnetic spintronics to realize high-density devices with ultrafast operation(17,18). However, electrical control of a Weyl metal has not yet been reported. Here we demonstrate the electrical switching of a topological antiferromagnetic state and its detection by the AHE at room temperature in a polycrystalline thin film(19) of the antiferromagnetic Weyl metal Mn3Sn9,10,12,20, which exhibits zero-field AHE. Using bilayer devices composed of Mn3Sn and nonmagnetic metals, we find that an electrical current density of about 10(10) to 10(11) amperes per square metre induces magnetic switching in the nonmagnetic metals, with a large change in Hall voltage. In addition, the current polarity along the bias field and the sign of the spin Hall angle of the nonmagnetic metals-positive for Pt (ref. (21)), close to 0 for Cu and negative for W (ref. (22))-determines the sign of the Hall voltage. Notably, the electrical switching in the antiferromagnet is achieved with the same protocol as that used for ferromagnetic metals(23,24). Our results may lead to further scientific and technological advances in topological magnetism and antiferromagnetic spintronics.


  
Extinction filters mediate the global effects of habitat fragmentation on animals 期刊论文
SCIENCE, 2019, 366 (6470) : 1236-+
作者:  Betts, Matthew G.;  Wolf, Christopher;  Pfeifer, Marion;  Banks-Leite, Cristina;  Arroyo-Rodriguez, Victor;  Ribeiro, Danilo Bandini;  Barlow, Jos;  Eigenbrod, Felix;  Faria, Deborah;  Fletcher, Robert J., Jr.;  Hadley, Adam S.;  Hawes, Joseph E.;  Holt, Robert D.;  Klingbeil, Brian;  Kormann, Urs;  Lens, Luc;  Levi, Taal;  Medina-Rangel, Guido F.;  Melles, Stephanie L.;  Mezger, Dirk;  Morante-Filho, Jose Carlos;  Orme, C. David L.;  Peres, Carlos A.;  Phalan, Benjamin T.;  Pidgeon, Anna;  Possingham, Hugh;  Ripple, William J.;  Slade, Eleanor M.;  Somarriba, Eduardo;  Tobias, Joseph A.;  Tylianakis, Jason M.;  Nicolas Urbina-Cardona, J.;  Valente, Jonathon J.;  Watling, James I.;  Wells, Konstans;  Wearn, Oliver R.;  Wood, Eric;  Young, Richard;  Ewers, Robert M.
收藏  |  浏览/下载:33/0  |  提交时间:2020/02/17
Linking global drivers of agricultural trade to on-the-ground impacts on biodiversity 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2019, 116 (46) : 23202-23208
作者:  Jonathan M. H. Green;  Simon A. Croft;  América P. Durán;  Andrew P. Balmford;  Neil D. Burgess;  Steve Fick;  Toby A. Gardner;  Javier Godar;  Clément Suavet;  Malika Virah-Sawmy;  Lucy E. Young;  and Christopher D. West
收藏  |  浏览/下载:7/0  |  提交时间:2019/11/27
supply chain  agricultural commodity  biodiversity impacts  telecoupling  species  
The evolutionary history of dogs in the Americas 期刊论文
SCIENCE, 2018, 361 (6397) : 81-+
作者:  Leathlobhair, Maire Ni;  Perri, Angela R.;  Irving-Pease, Evan K.;  Witt, Kelsey E.;  Linderholm, Anna;  Haile, James;  Lebrasseur, Ophelie;  Ameen, Carly;  Blick, Jeffrey;  Boyko, Adam R.;  Brace, Selina;  Cortes, Yahaira Nunes;  Crockford, Susan J.;  Devault, Alison;  Dimopoulos, Evangelos A.;  Eldridge, Morley;  Enk, Jacob;  Gopalakrishnan, Shyam;  Gori, Kevin;  Grimes, Vaughan;  Guiry, Eric;  Hansen, Anders J.;  Hulme-Beaman, Ardern;  Johnson, John;  Kitchen, Andrew;  Kasparov, Aleksei K.;  Kwon, Young-Mi;  Nikolskiy, Pavel A.;  Lope, Carlos Peraza;  Manin, Aurelie;  Martin, Terrance;  Meyer, Michael;  Myers, Kelsey Noack;  Omura, Mark;  Rouillard, Jean-Marie;  Pavlova, Elena Y.;  Sciulli, Paul;  Sinding, Mikkel-Holger S.;  Strakova, Andrea;  Ivanova, Varvara V.;  Widga, Christopher;  Willerslev, Eske;  Pitulko, Vladimir V.;  Barnes, Ian;  Gilbert, M. Thomas P.;  Dobney, Keith M.;  Malhi, Ripan S.;  Murchison, Elizabeth P.;  Larson, Greger;  Frantz, Laurent A. F.
收藏  |  浏览/下载:17/0  |  提交时间:2019/11/27
Relating large-scale subsidence to convection development in Arctic mixed-phase marine stratocumulus 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2018, 18 (3) : 1475-1494
作者:  Young, Gillian;  Connolly, Paul J.;  Dearden, Christopher;  Choularton, Thomas W.
收藏  |  浏览/下载:7/0  |  提交时间:2019/04/09
Observational assessment of the role of nocturnal residual-layer chemistry in determining daytime surface particulate nitrate concentrations 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2017, 17 (23)
作者:  Prabhakar, Gouri;  Parworth, Caroline L.;  Zhang, Xiaolu;  Kim, Hwajin;  Young, Dominique E.;  Beyersdorf, Andreas J.;  Ziemba, Luke D.;  Nowak, John B.;  Bertram, Timothy H.;  Faloona, Ian C.;  Zhang, Qi;  Cappa, Christopher D.
收藏  |  浏览/下载:7/0  |  提交时间:2019/04/09