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Evaluation of a Wastewater-Based Epidemiological Approach to Estimate the Prevalence of SARS-CoV-2 Infections and the Detection of Viral Variants in Disparate Oregon Communities at City and Neighborhood Scales 期刊论文
Environmental Health Perspectives, 2022
作者:  Blythe A. Layton;  Devrim Kaya;  Christine Kelly;  Kenneth J. Williamson;  Dana Alegre;  Silke M. Bachhuber;  Peter G. Banwarth;  Jeffrey W. Bethel;  Katherine Carter;  Benjamin D. Dalziel;  Mark Dasenko;  Matthew Geniza;  Andrea George;  Anne-Marie Girard;  Roy Haggerty;  Kathryn A. Higley;  Denise M. Hynes;  Jane Lubchenco;  Katherine R. McLaughlin;  F. Javier Nieto;  Aslan Noakes;  Matthew Peterson;  Adriana D. Piemonti;  Justin L. Sanders;  Brett M. Tyler;  Tyler S. Radniecki
收藏  |  浏览/下载:31/0  |  提交时间:2022/07/08
Structural and functional ramifications of antigenic drift in recent SARS-CoV-2 variants 期刊论文
Science, 2021
作者:  Meng Yuan;  Deli Huang;  Chang-Chun D. Lee;  Nicholas C. Wu;  Abigail M. Jackson;  Xueyong Zhu;  Hejun Liu;  Linghang Peng;  Marit J. van Gils;  Rogier W. Sanders;  Dennis R. Burton;  S. Momsen Reincke;  Harald Prüss;  Jakob Kreye;  David Nemazee;  Andrew B. Ward;  Ian A. Wilson
收藏  |  浏览/下载:44/0  |  提交时间:2021/08/17
Haplotype-resolved diverse human genomes and integrated analysis of structural variation 期刊论文
Science, 2021
作者:  Peter Ebert;  Peter A. Audano;  Qihui Zhu;  Bernardo Rodriguez-Martin;  David Porubsky;  Marc Jan Bonder;  Arvis Sulovari;  Jana Ebler;  Weichen Zhou;  Rebecca Serra Mari;  Feyza Yilmaz;  Xuefang Zhao;  PingHsun Hsieh;  Joyce Lee;  Sushant Kumar;  Jiadong Lin;  Tobias Rausch;  Yu Chen;  Jingwen Ren;  Martin Santamarina;  Wolfram Höps;  Hufsah Ashraf;  Nelson T. Chuang;  Xiaofei Yang;  Katherine M. Munson;  Alexandra P. Lewis;  Susan Fairley;  Luke J. Tallon;  Wayne E. Clarke;  Anna O. Basile;  Marta Byrska-Bishop;  André Corvelo;  Uday S. Evani;  Tsung-Yu Lu;  Mark J. P. Chaisson;  Junjie Chen;  Chong Li;  Harrison Brand;  Aaron M. Wenger;  Maryam Ghareghani;  William T. Harvey;  Benjamin Raeder;  Patrick Hasenfeld;  Allison A. Regier;  Haley J. Abel;  Ira M. Hall;  Paul Flicek;  Oliver Stegle;  Mark B. Gerstein;  Jose M. C. Tubio;  Zepeng Mu;  Yang I. Li;  Xinghua Shi;  Alex R. Hastie;  Kai Ye;  Zechen Chong;  Ashley D. Sanders;  Michael C. Zody;  Michael E. Talkowski;  Ryan E. Mills;  Scott E. Devine;  Charles Lee;  Jan O. Korbel;  Tobias Marschall;  Evan E. Eichler
收藏  |  浏览/下载:62/0  |  提交时间:2021/04/06
Sequence diversity analyses of an improved rhesus macaque genome enhance its biomedical utility 期刊论文
Science, 2020
作者:  Wesley C. Warren;  R. Alan Harris;  Marina Haukness;  Ian T. Fiddes;  Shwetha C. Murali;  Jason Fernandes;  Philip C. Dishuck;  Jessica M. Storer;  Muthuswamy Raveendran;  LaDeana W. Hillier;  David Porubsky;  Yafei Mao;  David Gordon;  Mitchell R. Vollger;  Alexandra P. Lewis;  Katherine M. Munson;  Elizabeth DeVogelaere;  Joel Armstrong;  Mark Diekhans;  Jerilyn A. Walker;  Chad Tomlinson;  Tina A. Graves-Lindsay;  Milinn Kremitzki;  Sofie R. Salama;  Peter A. Audano;  Merly Escalona;  Nicholas W. Maurer;  Francesca Antonacci;  Ludovica Mercuri;  Flavia A. M. Maggiolini;  Claudia Rita Catacchio;  Jason G. Underwood;  David H. O’Connor;  Ashley D. Sanders;  Jan O. Korbel;  Betsy Ferguson;  H. Michael Kubisch;  Louis Picker;  Ned H. Kalin;  Douglas Rosene;  Jon Levine;  David H. Abbott;  Stanton B. Gray;  Mar M. Sanchez;  Zsofia A. Kovacs-Balint;  Joseph W. Kemnitz;  Sara M. Thomasy;  Jeffrey A. Roberts;  Erin L. Kinnally;  John P. Capitanio;  J. H. Pate Skene;  Michael Platt;  Shelley A. Cole;  Richard E. Green;  Mario Ventura;  Roger W. Wiseman;  Benedict Paten;  Mark A. Batzer;  Jeffrey Rogers;  Evan E. Eichler
收藏  |  浏览/下载:41/0  |  提交时间:2020/12/22
Greater topoclimatic control of above‐ versus below‐ground communities 期刊论文
Global Change Biology, 2020
作者:  Heidi K. Mod;  Daniel Scherrer;  Valeria Di Cola;  Olivier Broennimann;  Quentin Blandenier;  Frank T. Breiner;  Aline Buri;  ;  ;  me Goudet;  Nicolas Guex;  Enrique Lara;  Edward A. D. Mitchell;  ;  ;  ne Niculita‐;  Hirzel;  Marco Pagni;  Loï;  c Pellissier;  Eric Pinto‐;  Figueroa;  Ian R. Sanders;  Benedikt R. Schmidt;  Christophe V. W. Seppey;  David Singer;  Sylvain Ursenbacher;  Erika Yashiro;  Jan R. van der Meer;  Antoine Guisan
收藏  |  浏览/下载:22/0  |  提交时间:2020/09/30
Drivers of future alien species impacts: An expert‐based assessment 期刊论文
Global Change Biology, 2020
作者:  Franz Essl;  Bernd Lenzner;  Sven Bacher;  Sarah Bailey;  Cesar Capinha;  Curtis Daehler;  Stefan Dullinger;  Piero Genovesi;  Cang Hui;  Philip E. Hulme;  Jonathan M. Jeschke;  Stelios Katsanevakis;  Ingolf Kü;  hn;  Brian Leung;  Andrew Liebhold;  Chunlong Liu;  Hugh J. MacIsaac;  Laura A. Meyerson;  Martin A. Nuñ;  ez;  Aní;  bal Pauchard;  Petr Pyš;  ek;  Wolfgang Rabitsch;  David M. Richardson;  Helen E. Roy;  Gregory M. Ruiz;  James C. Russell;  Nathan J. Sanders;  Dov F. Sax;  Riccardo Scalera;  Hanno Seebens;  Michael Springborn;  Anna Turbelin;  Mark van Kleunen;  Betsy von Holle;  Marten Winter;  Rafael D. Zenni;  Brady J. Mattsson;  Nuria Roura‐;  Pascual
收藏  |  浏览/下载:37/0  |  提交时间:2020/08/09
Hydrogen peroxide sensor HPCA1 is an LRR receptor kinase in Arabidopsis 期刊论文
NATURE, 2020, 578 (7796) : 577-+
作者:  Bogomilov, M.;  Tsenov, R.;  Vankova-Kirilova, G.;  Song, Y. P.;  Tang, J. Y.;  Li, Z. H.;  Bertoni, R.;  Bonesini, M.;  Chignoli, F.;  Mazza, R.;  Palladino, V;  de Bari, A.;  Orestano, D.;  Tortora, L.;  Kuno, Y.;  Sakamoto, H.;  Sato, A.;  Ishimoto, S.;  Chung, M.;  Sung, C. K.;  Filthaut, F.;  Jokovic, D.;  Maletic, D.;  Savic, M.;  Jovancevic, N.;  Nikolov, J.;  Vretenar, M.;  Ramberger, S.;  Asfandiyarov, R.;  Blondel, A.;  Drielsma, F.;  Karadzhov, Y.;  Boyd, S.;  Greis, J. R.;  Lord, T.;  Pidcott, C.;  Taylor, I;  Charnley, G.;  Collomb, N.;  Dumbell, K.;  Gallagher, A.;  Grant, A.;  Griffiths, S.;  Hartnett, T.;  Martlew, B.;  Moss, A.;  Muir, A.;  Mullacrane, I;  Oates, A.;  Owens, P.;  Stokes, G.;  Warburton, P.;  White, C.;  Adams, D.;  Bayliss, V;  Boehm, J.;  Bradshaw, T. W.;  Brown, C.;  Courthold, M.;  Govans, J.;  Hills, M.;  Lagrange, J-B;  Macwaters, C.;  Nichols, A.;  Preece, R.;  Ricciardi, S.;  Rogers, C.;  Stanley, T.;  Tarrant, J.;  Tucker, M.;  Watson, S.;  Wilson, A.;  Bayes, R.;  Nugent, J. C.;  Soler, F. J. P.;  Chatzitheodoridis, G. T.;  Dick, A. J.;  Ronald, K.;  Whyte, C. G.;  Young, A. R.;  Gamet, R.;  Cooke, P.;  Blackmore, V. J.;  Colling, D.;  Dobbs, A.;  Dornan, P.;  Franchini, P.;  Hunt, C.;  Jurj, P. B.;  Kurup, A.;  Long, K.;  Martyniak, J.;  Middleton, S.;  Pasternak, J.;  Uchida, M. A.;  Cobb, J. H.;  Booth, C. N.;  Hodgson, P.;  Langlands, J.;  Overton, E.;  Pec, V;  Smith, P. J.;  Wilbur, S.;  Ellis, M.;  Gardener, R. B. S.;  Kyberd, P.;  Nebrensky, J. J.;  DeMello, A.;  Gourlay, S.;  Lambert, A.;  Li, D.;  Luo, T.;  Prestemon, S.;  Virostek, S.;  Palmer, M.;  Witte, H.;  Adey, D.;  Bross, A. D.;  Bowring, D.;  Liu, A.;  Neuffer, D.;  Popovic, M.;  Rubinov, P.;  Freemire, B.;  Hanlet, P.;  Kaplan, D. M.;  Mohayai, T. A.;  Rajaram, D.;  Snopok, P.;  Torun, Y.;  Cremaldi, L. M.;  Sanders, D. A.;  Summers, D. J.;  Coney, L. R.;  Hanson, G. G.;  Heidt, C.
收藏  |  浏览/下载:76/0  |  提交时间:2020/07/03

Hydrogen peroxide (H2O2) is a major reactive oxygen species in unicellular and multicellular organisms, and is produced extracellularly in response to external stresses and internal cues(1-4). H2O2 enters cells through aquaporin membrane proteins and covalently modifies cytoplasmic proteins to regulate signalling and cellular processes. However, whether sensors for H2O2 also exist on the cell surface remains unknown. In plant cells, H2O2 triggers an influx of Ca2+ ions, which is thought to be involved in H2O2 sensing and signalling. Here, by using forward genetic screens based on Ca2+ imaging, we isolated hydrogen-peroxide-induced Ca(2+)increases (hpca) mutants in Arabidopsis, and identified HPCA1 as a leucine-rich-repeat receptor kinase belonging to a previously uncharacterized subfamily that features two extra pairs of cysteine residues in the extracellular domain. HPCA1 is localized to the plasma membrane and is activated by H2O2 via covalent modification of extracellular cysteine residues, which leads to autophosphorylation of HPCA1. HPCA1 mediates H2O2-induced activation of Ca2+ channels in guard cells and is required for stomatal closure. Our findings help to identify how the perception of extracellular H2O2 is integrated with responses to various external stresses and internal cues in plants, and have implications for the design of crops with enhanced fitness.


HPCA1, a member of a previously uncharacterized subfamily of leucine-rich-repeat receptor-like kinases, is the hydrogen-peroxide sensor at the plasma membrane in Arabidopsis.


  
Large-scale GWAS reveals insights into the genetic architecture of same-sex sexual behavior 期刊论文
SCIENCE, 2019, 365 (6456) : 882-+
作者:  Ganna, Andrea;  Verweij, Karin J. H.;  Nivard, Michel G.;  Maier, Robert;  Wedow, Robbee;  Busch, Alexander S.;  Abdellaoui, Abdel;  Guo, Shengru;  Sathirapongsasuti, J. Fah;  Lichtenstein, Paul;  Lundstrom, Sebastian;  Langstrom, Niklas;  Auton, Adam;  Harris, Kathleen Mullan;  Beecham, Gary W.;  Martin, Eden R.;  Sanders, Alan R.;  Perry, John R. B.;  Neale, Benjamin M.;  Zietsch, Brendan P.;  Agee, M.;  Alipanahi, B.;  Auton, A.;  Bell, R. K.;  Bryc, K.;  Elson, S. L.;  Fontanillas, P.;  Furlotte, N. A.;  Hicks, B.;  Huber, K. E.;  Jewett, E. M.;  Jiang, Y.;  Kleinman, A.;  Lin, K. -H.;  Litterman, N. K.;  McCreight, J. C.;  McIntyre, M. H.;  McManus, K. F.;  Mountain, J. L.;  Noblin, E. S.;  Northover, C. A. M.;  Pitts, S. J.;  Poznik, G. D.;  Shastri, A. J.;  Shelton, J. F.;  Shringarpure, S.;  Tian, C.;  Tung, J. Y.;  Vacic, V.;  Wang, X.;  Wilson, C. H.
收藏  |  浏览/下载:64/0  |  提交时间:2019/11/27
Genome-wide de novo risk score implicates promoter variation in autism spectrum disorder 期刊论文
SCIENCE, 2018, 362 (6420) : 1270-+
作者:  An, Joon-Yong;  Lin, Kevin;  Zhu, Lingxue;  Werling, Donna M.;  Dong, Shan;  Brand, Harrison;  Wang, Harold Z.;  Zhao, Xuefang;  Schwartz, Grace B.;  Collins, Ryan L.;  Currall, Benjamin B.;  Dastmalchi, Claudia;  Dea, Jeanselle;  Duhn, Clif;  Gilson, Michael C.;  Klei, Lambertus;  Liang, Lindsay;  Markenscoff-Papadimitriou, Eirene;  Pochareddy, Sirisha;  Ahituv, Nadav;  Buxbaum, Joseph D.;  Coon, Hilary;  Daly, Mark J.;  Kim, Young Shin;  Marth, Gabor T.;  Neale, Benjamin M.;  Quinlan, Aaron R.;  Rubenstein, John L.;  Sestan, Nenad;  State, Matthew W.;  Willsey, A. Jeremy;  Talkowski, Michael E.;  Devlin, Bernie;  Roeder, Kathryn;  Sanders, Stephan J.
收藏  |  浏览/下载:31/0  |  提交时间:2019/11/27
Dominance-diversity relationships in ant communities differ with invasion 期刊论文
GLOBAL CHANGE BIOLOGY, 2018, 24 (10) : 4614-4625
作者:  Arnan, Xavier;  Andersen, Alan N.;  Gibb, Heloise;  Parr, Catherine L.;  Sanders, Nathan J.;  Dunn, Robert R.;  Angulo, Elena;  Baccaro, Fabricio B.;  Bishop, Tom R.;  Boulay, Raphael;  Castracani, Cristina;  Cerda, Xim;  Del Toro, Israel;  Delsinne, Thibaut;  Donoso, David A.;  Elten, Emilie K.;  Fayle, Tom M.;  Fitzpatrick, Matthew C.;  Gomez, Crisanto;  Grasso, Donato A.;  Grossman, Blair F.;  Guenard, Benoit;  Gunawardene, Nihara;  Heterick, Brian;  Hoffmann, Benjamin D.;  Janda, Milan;  Jenkins, Clinton N.;  Klimes, Petr;  Lach, Lori;  Laeger, Thomas;  Leponce, Maurice;  Lucky, Andrea;  Majer, Jonathan;  Menke, Sean;  Mezger, Dirk;  Mori, Alessandra;  Moses, Jimmy;  Munyai, Thinandavha Caswell;  Paknia, Omid;  Pfeiffer, Martin;  Philpott, Stacy M.;  Souza, Jorge L. P.;  Tista, Melanie;  Vasconcelos, Heraldo L.;  Retana, Javier
收藏  |  浏览/下载:41/0  |  提交时间:2019/04/09
ants  behavioral dominance  coexistence  dominance-impoverishment rule  global scale  invasive species  precipitation  species richness  temperature