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Coupling delay controls synchronized oscillation in the segmentation clock 期刊论文
NATURE, 2020
作者:  Yoshioka-Kobayashi, Kumiko;  Matsumiya, Marina;  Niino, Yusuke;  Isomura, Akihiro;  Kori, Hiroshi;  Miyawaki, Atsushi;  Kageyama, Ryoichiro
收藏  |  浏览/下载:17/0  |  提交时间:2020/07/03

Individual cellular activities fluctuate but are constantly coordinated at the population level via cell-cell coupling. A notable example is the somite segmentation clock, in which the expression of clock genes (such as Hes7) oscillates in synchrony between the cells that comprise the presomitic mesoderm (PSM)(1,2). This synchronization depends on the Notch signalling pathway  inhibiting this pathway desynchronizes oscillations, leading to somite fusion(3-7). However, how Notch signalling regulates the synchronicity of HES7 oscillations is unknown. Here we establish a live-imaging system using a new fluorescent reporter (Achilles), which we fuse with HES7 to monitor synchronous oscillations in HES7 expression in the mouse PSM at a single-cell resolution. Wild-type cells can rapidly correct for phase fluctuations in HES7 oscillations, whereas the absence of the Notch modulator gene lunatic fringe (Lfng) leads to a loss of synchrony between PSM cells. Furthermore, HES7 oscillations are severely dampened in individual cells of Lfng-null PSM. However, when Lfng-null PSM cells were completely dissociated, the amplitude and periodicity of HES7 oscillations were almost normal, which suggests that LFNG is involved mostly in cell-cell coupling. Mixed cultures of control and Lfng-null PSM cells, and an optogenetic Notch signalling reporter assay, revealed that LFNG delays the signal-sending process of intercellular Notch signalling transmission. These results-together with mathematical modelling-raised the possibility that Lfng-null PSM cells shorten the coupling delay, thereby approaching a condition known as the oscillation or amplitude death of coupled oscillators(8). Indeed, a small compound that lengthens the coupling delay partially rescues the amplitude and synchrony of HES7 oscillations in Lfng-null PSM cells. Our study reveals a delay control mechanism of the oscillatory networks involved in somite segmentation, and indicates that intercellular coupling with the correct delay is essential for synchronized oscillation.


Monitoring cells of the mouse presomitic mesoderm using the Achilles reporter fused to HES7 sheds light on the mechanisms that underpin synchronous oscillations in the expression of clock genes between neighbouring cells.


  
Spatial heterogeneity in climate change effects decouples the long-term dynamics of wild reindeer populations in the high Arctic 期刊论文
GLOBAL CHANGE BIOLOGY, 2019, 25 (11) : 3656-3668
作者:  Hansen, Brage Bremset;  Pedersen, Ashild Onvik;  Peeters, Bart;  Le Moullec, Mathilde;  Albon, Steve D.;  Herfindal, Ivar;  Saether, Bernt-Erik;  Grotan, Vidar;  Aanes, Ronny
收藏  |  浏览/下载:30/0  |  提交时间:2019/11/27
Arctic  caribou and reindeer  climate change  meta-population  population dynamics  spatial heterogeneity  spatial synchrony  ungulate  
Temporal scale of environmental correlations affects ecological synchrony 期刊论文
ECOLOGY LETTERS, 2018, 21 (12) : 1800-1811
作者:  Desharnais, Robert A.;  Reuman, Daniel C.;  Costantino, Robert F.;  Cohen, Joel E.
收藏  |  浏览/下载:16/0  |  提交时间:2019/04/09
Ecological synchrony  environmental correlations  metapopulations  microcosm experiments  Moran effect  population dispersal  spectral analysis  Tribolium  
Metapopulation dynamics in a changing climate: Increasing spatial synchrony in weather conditions drives metapopulation synchrony of a butterfly inhabiting a fragmented landscape 期刊论文
GLOBAL CHANGE BIOLOGY, 2018, 24 (9) : 4316-4329
作者:  Kahilainen, Aapo;  van Nouhuys, Saskya;  Schulz, Torsti;  Saastamoinen, Marjo
收藏  |  浏览/下载:27/0  |  提交时间:2019/04/09
climate change  dispersal  Lepidoptera  life history  Melitaea cinxia  metapopulation dynamics  population synchrony  precipitation  temperature  trophic interactions  
Moving forward in circles: challenges and opportunities in modelling population cycles 期刊论文
ECOLOGY LETTERS, 2017, 20 (8)
作者:  Barraquand, Frederic;  Louca, Stilianos;  Abbott, Karen C.;  Cobbold, Christina A.;  Cordoleani, Flora;  DeAngelis, Donald L.;  Elderd, Bret D.;  Fox, Jeremy W.;  Greenwood, Priscilla;  Hilker, Frank M.;  Murray, Dennis L.;  Stieha, Christopher R.;  Taylor, Rachel A.;  Vitense, Kelsey;  Wolkowicz, Gail S. K.;  Tyson, Rebecca C.
收藏  |  浏览/下载:27/0  |  提交时间:2019/04/09
Chaos  cycle loss  evolution  forcing  mechanistic models  population fluctuations  predator-prey  stochasticity  synchrony