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A mycobacterial ABC transporter mediates the uptake of hydrophilic compounds 期刊论文
NATURE, 2020, 580 (7803) : 409-+
作者:  Al-Shayeb, Basem;  Sachdeva, Rohan;  Chen, Lin-Xing;  Ward, Fred;  Munk, Patrick;  Devoto, Audra;  Castelle, Cindy J.;  Olm, Matthew R.;  Bouma-Gregson, Keith;  Amano, Yuki;  He, Christine;  Meheust, Raphael;  Brooks, Brandon;  Thomas, Alex;  Levy, Adi;  Matheus-Carnevali, Paula;  Sun, Christine;  Goltsman, Daniela S. A.;  Borton, Mikayla A.;  Sharrar, Allison;  Jaffe, Alexander L.;  Nelson, Tara C.;  Kantor, Rose;  Keren, Ray;  Lane, Katherine R.;  Farag, Ibrahim F.;  Lei, Shufei;  Finstad, Kari;  Amundson, Ronald;  Anantharaman, Karthik;  Zhou, Jinglie;  Probst, Alexander J.;  Power, Mary E.;  Tringe, Susannah G.;  Li, Wen-Jun;  Wrighton, Kelly;  Harrison, Sue;  Morowitz, Michael;  Relman, David A.;  Doudna, Jennifer A.;  Lehours, Anne-Catherine;  Warren, Lesley;  Cate, Jamie H. D.;  Santini, Joanne M.;  Banfield, Jillian F.
收藏  |  浏览/下载:41/0  |  提交时间:2020/07/03

Mycobacterium tuberculosis (Mtb) is an obligate human pathogen and the causative agent of tuberculosis(1-3). Although Mtb can synthesize vitamin B-12 (cobalamin) de novo, uptake of cobalamin has been linked to pathogenesis of tuberculosis2. Mtb does not encode any characterized cobalamin transporter(4-6)  however, the gene rv1819c was found to be essential for uptake of cobalamin(1). This result is difficult to reconcile with the original annotation of Rv1819c as a protein implicated in the transport of antimicrobial peptides such as bleomycin(7). In addition, uptake of cobalamin seems inconsistent with the amino acid sequence, which suggests that Rv1819c has a bacterial ATP-binding cassette (ABC)-exporter fold1. Here, we present structures of Rv1819c, which reveal that the protein indeed contains the ABC-exporter fold, as well as a large water-filled cavity of about 7,700 angstrom(3), which enables the protein to transport the unrelated hydrophilic compounds bleomycin and cobalamin. On the basis of these structures, we propose that Rv1819c is a multi-solute transporter for hydrophilic molecules, analogous to the multidrug exporters of the ABC transporter family, which pump out structurally diverse hydrophobic compounds from cells(8-11).


  
When Do Complex Transport Dynamics Arise in Natural Groundwater Systems? 期刊论文
WATER RESOURCES RESEARCH, 2020, 56 (2)
作者:  Wu, J.;  Lester, D. R.;  Trefry, M. G.;  Metcalfe, G.
收藏  |  浏览/下载:7/0  |  提交时间:2020/07/02
Darcy flow  tidal aquifer  poroelastic  solute transport  groundwater  
How Dynamic Boundary Conditions Induce Solute Trapping and Quasi-stagnant Zones in Laboratory Experiments Comprising Unsaturated Heterogeneous Porous Media 期刊论文
WATER RESOURCES RESEARCH, 2019, 55 (12) : 10765-10780
作者:  Cremer, C. J. M.;  Neuweiler, I.
收藏  |  浏览/下载:8/0  |  提交时间:2020/02/16
laboratory experiment  unsaturated porous media  conservative solute transport  dynamic boundary conditions  
Pore-Scale Visualization and Quantification of Transient Solute Transport Using Fast Microcomputed Tomography 期刊论文
WATER RESOURCES RESEARCH, 2019
作者:  Van Offenwert, Stefanie;  Cnudde, Veerle;  Bultreys, Tom
收藏  |  浏览/下载:5/0  |  提交时间:2020/02/16
solute transport  pore-scale imaging  fast microcomputed tomography  
Analysis of the Effects of Dam Release Properties and Ambient Groundwater Flow on Surface Water-Groundwater Exchange Over a 100-km-Long Reach 期刊论文
WATER RESOURCES RESEARCH, 2019
作者:  Ferencz, Stephen B.;  Cardenas, M. Bayani;  Neilson, Bethany T.
收藏  |  浏览/下载:7/0  |  提交时间:2019/11/27
hydropeaking  surface water-groundwater interactions  modeling  dams  hyporheic  solute transport  
Effects of Turbulent Hyporheic Mixing on Reach-Scale Transport 期刊论文
WATER RESOURCES RESEARCH, 2019, 55 (5) : 3780-3795
作者:  Roche, K. R.;  Li, A.;  Bolster, D.;  Wagner, G. J.;  Packman, A. I.
收藏  |  浏览/下载:8/0  |  提交时间:2019/11/26
hyporheic exchange  turbulence  transport  stream  CTRW  solute  
Models of Single-Well Push-Pull Test With Mixing Effect in the Wellbore 期刊论文
WATER RESOURCES RESEARCH, 2018, 54 (12) : 10155-10171
作者:  Wang, Quanrong;  Shi, Wenguang;  Zhan, Hongbin;  Gu, Haochen;  Chen, Kewei
收藏  |  浏览/下载:8/0  |  提交时间:2019/04/09
Radial dispersion  Parameter estimation  Solute transport  Modeling  
Emergent Macrophyte Root Architecture Controls Subsurface Solute Transport 期刊论文
WATER RESOURCES RESEARCH, 2018, 54 (9) : 5958-5972
作者:  Nikolakopoulou, M.;  Argerich, A.;  Drummond, J. D.;  Gacia, E.;  Marti, E.;  Sorolla, A.;  Sabater, F.
收藏  |  浏览/下载:8/0  |  提交时间:2019/04/09
emergent macrophytes  root architecture  solute transport  stream restoration  
Calculating Trajectories Associated With Solute Transport in a Heterogeneous Medium 期刊论文
WATER RESOURCES RESEARCH, 2018, 54 (9) : 6890-6908
作者:  Vasco, D. W.;  Pride, Steven R.;  Zahasky, Christopher;  Benson, Sally M.
收藏  |  浏览/下载:8/0  |  提交时间:2019/04/09
tracer  transport  streamlines  solute transport  inverse modeling  visualization  
Emergent archetype patterns of coupled hydrologic and biogeochemical responses in catchments 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2017, 44 (9)
作者:  Musolff, A.;  Fleckenstein, J. H.;  Rao, P. S. C.;  Jawitz, J. W.
收藏  |  浏览/下载:5/0  |  提交时间:2019/04/09
catchment  chemostatic export  solute export  water quality  biogeochemistry  water travel times