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Coronavirus vaccines: key questions 期刊论文
NATURE, 2020, 579 (7800) : 481-481
作者:  Esposito, Elga;  Li, Wenlu;  T. Mandeville, Emiri;  Park, Ji-Hyun;  Sencan, Ikbal;  Guo, Shuzhen;  Shi, Jingfei;  Lan, Jing;  Lee, Janice;  Hayakawa, Kazuhide;  Sakadzic, Sava;  Ji, Xunming;  Lo, Eng H.
收藏  |  浏览/下载:12/0  |  提交时间:2020/07/03

Some experts warn that accelerated testing will involve some risky trade-offs.


Some experts warn that accelerated testing will involve some risky trade-offs.


  
Feedback generates a second receptive field in neurons of the visual cortex 期刊论文
NATURE, 2020
作者:  Shi, Enzheng;  Yuan, Biao;  Shiring, Stephen B.;  Gao, Yao;  Akriti;  Guo, Yunfan;  Su, Cong;  Lai, Minliang;  Yang, Peidong;  Kong, Jing;  Savoie, Brett M.;  Yu, Yi;  Dou, Letian
收藏  |  浏览/下载:45/0  |  提交时间:2020/07/03

Animals sense the environment through pathways that link sensory organs to the brain. In the visual system, these feedforward pathways define the classical feedforward receptive field (ffRF), the area in space in which visual stimuli excite a neuron(1). The visual system also uses visual context-the visual scene surrounding a stimulus-to predict the content of the stimulus(2), and accordingly, neurons have been identified that are excited by stimuli outside their ffRF(3-8). However, the mechanisms that generate excitation to stimuli outside the ffRF are unclear. Here we show that feedback projections onto excitatory neurons in the mouse primary visual cortex generate a second receptive field that is driven by stimuli outside the ffRF. The stimulation of this feedback receptive field (fbRF) elicits responses that are slower and are delayed in comparison with those resulting from the stimulation of the ffRF. These responses are preferentially reduced by anaesthesia and by silencing higher visual areas. Feedback inputs from higher visual areas have scattered receptive fields relative to their putative targets in the primary visual cortex, which enables the generation of the fbRF. Neurons with fbRFs are located in cortical layers that receive strong feedback projections and are absent in the main input layer, which is consistent with a laminar processing hierarchy. The observation that large, uniform stimuli-which cover both the fbRF and the ffRF-suppress these responses indicates that the fbRF and the ffRF are mutually antagonistic. Whereas somatostatin-expressing inhibitory neurons are driven by these large stimuli, inhibitory neurons that express parvalbumin and vasoactive intestinal peptide have mutually antagonistic fbRF and ffRF, similar to excitatory neurons. Feedback projections may therefore enable neurons to use context to estimate information that is missing from the ffRF and to report differences in stimulus features across visual space, regardless of whether excitation occurs inside or outside the ffRF. By complementing the ffRF, the fbRF that we identify here could contribute to predictive processing.


Feedback projections onto neurons of the mouse primary visual cortex generate a second excitatory receptive field that is driven by stimuli outside of the classical feedforward receptive field, with responses mediated by higher visual areas.


  
Action of a minimal contractile bactericidal nanomachine 期刊论文
NATURE, 2020, 580 (7805) : 658-+
作者:  Peng, Ruchao;  Xu, Xin;  Jing, Jiamei;  Wang, Min;  Peng, Qi;  Liu, Sheng;  Wu, Ying;  Bao, Xichen;  Wang, Peiyi;  Qi, Jianxun;  Gao, George F.;  Shi, Yi
收藏  |  浏览/下载:13/0  |  提交时间:2020/07/03

The authors report near-atomic resolution structures of the R-type bacteriocin from Pseudomonas aeruginosa in the pre-contraction and post-contraction states, and these structures provide insight into the mechanism of action of molecular syringes.


R-type bacteriocins are minimal contractile nanomachines that hold promise as precision antibiotics(1-4). Each bactericidal complex uses a collar to bridge a hollow tube with a contractile sheath loaded in a metastable state by a baseplate scaffold(1,2). Fine-tuning of such nucleic acid-free protein machines for precision medicine calls for an atomic description of the entire complex and contraction mechanism, which is not available from baseplate structures of the (DNA-containing) T4 bacteriophage(5). Here we report the atomic model of the complete R2 pyocin in its pre-contraction and post-contraction states, each containing 384 subunits of 11 unique atomic models of 10 gene products. Comparison of these structures suggests the following sequence of events during pyocin contraction: tail fibres trigger lateral dissociation of baseplate triplexes  the dissociation then initiates a cascade of events leading to sheath contraction  and this contraction converts chemical energy into mechanical force to drive the iron-tipped tube across the bacterial cell surface, killing the bacterium.


  
A simple dynamic model explains the diversity of island birds worldwide 期刊论文
NATURE, 2020
作者:  Li, Junxue;  Wilson, C. Blake;  Cheng, Ran;  Lohmann, Mark;  Kavand, Marzieh;  Yuan, Wei;  Aldosary, Mohammed;  Agladze, Nikolay;  Wei, Peng;  Sherwin, Mark S.;  Shi, Jing
收藏  |  浏览/下载:13/0  |  提交时间:2020/07/03

Colonization, speciation and extinction are dynamic processes that influence global patterns of species richness(1-6). Island biogeography theory predicts that the contribution of these processes to the accumulation of species diversity depends on the area and isolation of the island(7,8). Notably, there has been no robust global test of this prediction for islands where speciation cannot be ignored(9), because neither the appropriate data nor the analytical tools have been available. Here we address both deficiencies to reveal, for island birds, the empirical shape of the general relationships that determine how colonization, extinction and speciation rates co-vary with the area and isolation of islands. We compiled a global molecular phylogenetic dataset of birds on islands, based on the terrestrial avifaunas of 41 oceanic archipelagos worldwide (including 596 avian taxa), and applied a new analysis method to estimate the sensitivity of island-specific rates of colonization, speciation and extinction to island features (area and isolation). Our model predicts-with high explanatory power-several global relationships. We found a decline in colonization with isolation, a decline in extinction with area and an increase in speciation with area and isolation. Combining the theoretical foundations of island biogeography(7,8) with the temporal information contained in molecular phylogenies(10) proves a powerful approach to reveal the fundamental relationships that govern variation in biodiversity across the planet.


Using a global molecular phylogenetic dataset of birds on islands, the sensitivity of island-specific rates of colonization, speciation and extinction to island features (area and isolation) is estimated.


  
Drivers of improved PM2.5 air quality in China from 2013 to 2017 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2019
作者:  Qiang Zhang;  Yixuan Zheng;  Dan Tong;  Min Shao;  Shuxiao Wang;  Yuanhang Zhang;  Xiangde Xu;  Jinnan Wang;  Hong He;  Wenqing Liu;  Yihui Ding;  Yu Lei;  Junhua Li;  Zifa Wang;  Xiaoye Zhang;  Yuesi Wang;  Jing Cheng;  Yang Liu;  Qinren Shi;  Liu Yan;  Guannan Geng;  Chaopeng Hong;  Meng Li;  Fei Liu;  Bo Zheng;  Junji Cao;  Aijun Ding;  Jian Gao;  Qingyan Fu;  Juntao Huo;  Baoxian Liu;  Zirui Liu;  Fumo Yang;  Kebin He;  and Jiming Hao
收藏  |  浏览/下载:12/0  |  提交时间:2019/11/27
clean air actions  PM  emission abatements  air quality improvements  health benefits  
Inland water bodies in China: Features discovered in the long-term satellite data 期刊论文
Proceedings of the National Academy of Sciences of the United States of America, 2019, 116 (51) : 25491-25496
作者:  Shuailong Feng;  Shuguang Liu;  Zhihong Huang;  Lei Jing;  Meifang Zhao;  Xi Peng;  Wende Yan;  Yiping Wu;  Yihe Lv;  Andrew R. Smith;  Morag A. McDonald;  Sopan D. Patil;  Arbi J. Sarkissian;  Zhihua Shi;  Jun Xia;  and U. S. Ogbodo
收藏  |  浏览/下载:22/0  |  提交时间:2020/04/16
inland water bodies  size-abundance  land use change  climate change  
Comprehensive functional genomic resource and integrative model for the human brain 期刊论文
SCIENCE, 2018, 362 (6420) : 1266-+
作者:  Wang, Daifeng;  Liu, Shuang;  Warrell, Jonathan;  Won, Hyejung;  Shi, Xu;  Navarro, Fabio C. P.;  Clarke, Declan;  Gu, Mengting;  Emani, Prashant;  Yang, Yucheng T.;  Xu, Min;  Gandal, Michael J.;  Lou, Shaoke;  Zhang, Jing;  Park, Jonathan J.;  Yan, Chengfei;  Rhie, Suhn Kyong;  Manakongtreecheep, Kasidet;  Zhou, Holly;  Nathan, Aparna;  Peters, Mette;  Mattei, Eugenio;  Fitzgerald, Dominic;  Brunetti, Tonya;  Moore, Jill;  Jiang, Yan;  Girdhar, Kiran;  Hoffman, Gabriel E.;  Kalayci, Selim;  Gumus, Zeynep H.;  Crawford, Gregory E.;  Roussos, Panos;  Akbarian, Schahram;  Jaffe, Andrew E.;  White, Kevin P.;  Weng, Zhiping;  Sestan, Nenad;  Geschwind, Daniel H.;  Knowles, James A.;  Gerstein, Mark B.
收藏  |  浏览/下载:13/0  |  提交时间:2019/11/27
An autoimmune disease variant of IgG1 modulates B cell activation and differentiation 期刊论文
SCIENCE, 2018, 362 (6415) : 700-+
作者:  Chen, Xiangjun;  Sun, Xiaolin;  Yang, Wei;  Yang, Bing;  Zhao, Xiaozhen;  Chen, Shuting;  He, Lili;  Chen, Hui;  Yang, Changmei;  Xiao, Le;  Chang, Zai;  Guo, Jianping;  He, Jing;  Zhang, Fuping;  Zheng, Fang;  Hu, Zhibin;  Yang, Zhiyong;  Lou, Jizhong;  Zheng, Wenjie;  Qi, Hai;  Xu, Chenqi;  Zhang, Hong;  Shan, Hongying;  Zhou, Xu-jie;  Wang, Qingwen;  Shi, Yi;  Lai, Luhua;  Li, Zhanguo;  Liu, Wanli
收藏  |  浏览/下载:14/0  |  提交时间:2019/11/27
A single transcription factor promotes both yield and immunity in rice 期刊论文
SCIENCE, 2018, 361 (6406) : 1026-1028
作者:  Wang, Jing;  Zhou, Lian;  Shi, Hui;  Chern, Mawsheng;  Yu, Hong;  Yi, Hong;  He, Min;  Yin, Junjie;  Zhu, Xiaobo;  Li, Yan;  Li, Weitao;  Liu, Jiali;  Wang, Jichun;  Chen, Xiaoqiong;  Qing, Hai;  Wang, Yuping;  Liu, Guifu;  Wang, Wenming;  Li, Ping;  Wu, Xianjun;  Zhu, Lihuang;  Zhou, Jian-Min;  Ronald, Pamela C.;  Li, Shigui;  Li, Jiayang;  Chen, Xuewei
收藏  |  浏览/下载:20/0  |  提交时间:2019/11/27
Gut bacteria selectively promoted by dietary fibers alleviate type 2 diabetes 期刊论文
SCIENCE, 2018, 359 (6380) : 1151-+
作者:  Zhao, Liping;  Zhang, Feng;  Ding, Xiaoying;  Wu, Guojun;  Lam, Yan Y.;  Wang, Xuejiao;  Fu, Huaqing;  Xue, Xinhe;  Lu, Chunhua;  Ma, Jilin;  Yu, Lihua;  Xu, Chengmei;  Ren, Zhongying;  Xu, Ying;  Xu, Songmei;  Shen, Hongli;  Zhu, Xiuli;  Shi, Yu;  Shen, Qingyun;  Dong, Weiping;  Liu, Rui;  Ling, Yunxia;  Zeng, Yue;  Wang, Xingpeng;  Zhang, Qianpeng;  Wang, Jing;  Wang, Linghua;  Wu, Yanqiu;  Zeng, Benhua;  Wei, Hong;  Zhang, Menghui;  Peng, Yongde;  Zhang, Chenhong
收藏  |  浏览/下载:26/0  |  提交时间:2019/11/27